Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1229 ATGGATGCAACGGAATGTGCTCTGTTACAGACTGTTGAAATCAAGGTGAAAATGGACTGTGATGGCTGCGAAAGAAGAGTCAGAAATGCTGTCACTCGCATGAAAGGTGTGAAAGAAGTGGAGGTGATAAGGAAGCAAAGCAGAGTGAAAGTGACAGGGTATGTGGAAGCGAACAAAGTGTTAAAGGGAGTGAAGAGTACAGGGAAGAGAGCAGAGTTTTGGCCATACGTCCCCTATAACTTAGTGGCATATCCTTATGCACCTCAGGCTTATGACAAGAGGGCCCCTTCTGGTTTTGTCAAGAATGTTACTCAAGCAGTTCCTCCCCATAATGCGCCTGATGAGAAGTTCACCACCCTCTTCAGTGACGAGAACCCTAATTCTTGCTCCATCATGTGA 399 0.4612 MDATECALLQTVEIKVKMDCDGCERRVRNAVTRMKGVKEVEVIRKQSRVKVTGYVEANKVLKGVKSTGKRAEFWPYVPYNLVAYPYAPQAYDKRAPSGFVKNVTQAVPPHNAPDEKFTTLFSDENPNSCSIM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1229 132 CDD HMA 13 72 IPR006121 GO:0046872
Lele49g1229 132 Gene3D - 7 72 - -
Lele49g1229 132 ProSiteProfiles Heavy-metal-associated domain profile. 18 73 IPR006121 GO:0046872
Lele49g1229 132 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 11 129 IPR045181 GO:0046872
Lele49g1229 132 SUPERFAMILY HMA, heavy metal-associated domain 9 75 IPR036163 GO:0046872
Lele49g1229 132 Pfam Heavy-metal-associated domain 15 69 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1229 Lele-ChrLele49 8226898 8230172 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1229 49 8226898 8230172 Lele49g1229 49 8226898 8230172 ECH
Lele49g1229 49 8226898 8230172 Lele51g1245 51 8246042 8247669 hybridization
Lele49g1229 49 8226898 8230172 Lele52g1562 52 19526645 19528310 hybridization