Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1245 ATGGGAGTGCTTGCTTTGATTTCGGATTTCTTCATAGTTTATGGCAGAAAAAAGAGACGCAAACCATTGCAGACTGTTGAAATCAAGGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTAAAAAATGCTGTCACTCGCATGAAAGGTGTGAAGGAAGTGGAGGTGATAAGGAAGCAAAGCAGAGTGAAAGTGACAGGGTACGTGGAAGCAAACAAAGTGTTAAAGAGAGTGAAGAGTACAGGGAAGAGAGCAGAGTTTTGGCCATATGTTCCCTATAACTTAGTGGCATATCCTTATGCACCTCAGGCTTATGACAAGAGGGCTCCTTCTGGTTTTGTCAAGAATGTTACTCAAGCGGTCCCTCCTCCTAATGCGCCTGATGAGAAGTTCACCACCCTCTTCAGTGATGAAAACCCTAATTCTTGCTCCATCATGTGA 441 0.4376 MGVLALISDFFIVYGRKKRRKPLQTVEIKVKMDCDGCERRVKNAVTRMKGVKEVEVIRKQSRVKVTGYVEANKVLKRVKSTGKRAEFWPYVPYNLVAYPYAPQAYDKRAPSGFVKNVTQAVPPPNAPDEKFTTLFSDENPNSCSIM 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1245 146 CDD HMA 27 86 IPR006121 GO:0046872
Lele51g1245 146 FunFam Heavy metal-associated isoprenylated plant protein 26 13 88 - -
Lele51g1245 146 SUPERFAMILY HMA, heavy metal-associated domain 23 89 IPR036163 GO:0046872
Lele51g1245 146 Gene3D - 11 88 - -
Lele51g1245 146 ProSiteProfiles Heavy-metal-associated domain profile. 32 87 IPR006121 GO:0046872
Lele51g1245 146 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 143 IPR045181 GO:0046872
Lele51g1245 146 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1245 Lele-ChrLele51 8246042 8247669 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1245 51 8246042 8247669 Lele51g1245 51 8246042 8247669 ECH
Lele49g1229 49 8226898 8230172 Lele51g1245 51 8246042 8247669 hybridization