Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1562 ATGGGTGGTTGTGTTCTGTTGCAGACCGTTGAAATCAAGGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTCAGAAATGCTGTCACTCGCATGAAAGGTGTGAAAGAAGTGGAGGTGATAAGGAAGCAAAGCAGAGTGAAAGTGACAGGATATGTGGAAGCAAGCAGAGTGTTAAAGAGAGTGAAGAGTACAGGGAAGAGAGCAGAGTTTTGGCCATATGTTCCCTATAACTTAGTGGCATATCCTTATGCACCTCAGGCTTATGACAAGAGGGCTCCTTCTGGTTTTGTCAAGAATGTTACCCAAGCAGTTCCTCCTCCTAATGCTCTTGATGAGAAGTTCACTACCTTCTTCAGTGATGAAAACCCTAATTCTTGCTCCATCATGTGA 393 0.4402 MGGCVLLQTVEIKVKMDCDGCERRVRNAVTRMKGVKEVEVIRKQSRVKVTGYVEASRVLKRVKSTGKRAEFWPYVPYNLVAYPYAPQAYDKRAPSGFVKNVTQAVPPPNALDEKFTTFFSDENPNSCSIM 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1562 130 CDD HMA 11 70 IPR006121 GO:0046872
Lele52g1562 130 SUPERFAMILY HMA, heavy metal-associated domain 6 73 IPR036163 GO:0046872
Lele52g1562 130 Gene3D - 7 70 - -
Lele52g1562 130 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 9 127 IPR045181 GO:0046872
Lele52g1562 130 ProSiteProfiles Heavy-metal-associated domain profile. 16 71 IPR006121 GO:0046872
Lele52g1562 130 Pfam Heavy-metal-associated domain 13 67 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1562 Lele-ChrLele52 19526645 19528310 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1562 52 19526645 19528310 Lele52g1562 52 19526645 19528310 ECH
Lele49g1229 49 8226898 8230172 Lele52g1562 52 19526645 19528310 hybridization