Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1101 ATGCAAGGAGTGAGACCAGGGGGGGCTCGGAAGGCTCTCGTTGTTATAATAATCACTTCGATCTTTTTCCGATTCGTCTGTGCATCCAACCACTCCGTCGGCGGACCTTCCGGTTGGGACCTCCATTCGAATCTCCAATTGTGGTCTGCTGCGACCACTTTTCTTGTTGGTGACAATCTAGTGTTCACATACACGCCGAACCACGACGTGGTGGAAGTTGGCCAGCTTGGTTATGACAACTGTGTAATCTCCAACGCCATCGGCACCTACGATGATGGAGAGACTGTAATTCAACTCACCGAACCAGTAATTAGGCACTTCGTCTGTGGCCGATCAGGGCACTGTCAACAAGGACTGAAACTACAGGTTCAAGTTCTTGCACCGCCCAACGATGGAACTAGTGCTGGTAGTGGTCCACGACCCAGGCTCCCTCCAAGGAAACCTCCTACTCCGCCTCGAAGATCTCCTCCTCCACCTTCTCGTGTGCCATCTTCTCCATCTTCTCTGCCATATCCTCCACCTGCTGCTGTACCTGCTGTACCTCTACCTGTTTCTGGTGTTGATAACATCAAGGTGGATACGCCAGGGTTGTTCCAAGGATTGGTGGTGCTGCTAGTGCTTTACTCTCTACACTCGCGCTGGTTTGATTTTCACCATTTGGCGATTCCTCGTTTTGATCTGAGATGA 687 0.5124 MQGVRPGGARKALVVIIITSIFFRFVCASNHSVGGPSGWDLHSNLQLWSAATTFLVGDNLVFTYTPNHDVVEVGQLGYDNCVISNAIGTYDDGETVIQLTEPVIRHFVCGRSGHCQQGLKLQVQVLAPPNDGTSAGSGPRPRLPPRKPPTPPRRSPPPPSRVPSSPSSLPYPPPAAVPAVPLPVSGVDNIKVDTPGLFQGLVVLLVLYSLHSRWFDFHHLAIPRFDLR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1101 228 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Lele48g1101 228 FunFam Blue copper 27 131 - -
Lele48g1101 228 MobiDBLite consensus disorder prediction 141 172 - -
Lele48g1101 228 CDD Phytocyanin 30 125 - -
Lele48g1101 228 PANTHER BLUE COPPER PROTEIN 28 154 IPR039391 GO:0009055
Lele48g1101 228 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Lele48g1101 228 MobiDBLite consensus disorder prediction 127 172 - -
Lele48g1101 228 Pfam Plastocyanin-like domain 42 118 IPR003245 GO:0009055
Lele48g1101 228 Gene3D - 27 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1101 Lele-ChrLele48 15764486 15765608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1101 8 166 Miscellaneous Gene Families AT2G32300 37.267 2.50e-31 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1101 48 15764486 15765608 Lele48g1101 48 15764486 15765608 ECH
Lele45g0360 45 2840380 2841439 Lele48g1101 48 15764486 15765608 hybridization
Lele46g0387 46 2584211 2585283 Lele48g1101 48 15764486 15765608 hybridization