Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0387 ATGCAAGGAGTGAGACCAGGGTGGGCTGGGAAGGCTCTTGTTATAATAATCACTTCGATCTTTTTCCGATGCGTCTGTGCATCCAACCACTCCGTCGGCGGACCTTCCGGTTGGGACCTCCGTTCGAATCTCCAATTGTGGTCTGCTGCGACCGCTTTTCTTGTTGGTGACAATCTAGTGTTCACATACACGCCGAACCACGACGTGGTGGAAGTTAGCCAGCTTGGTTATGACACCTGTGTAATCTCCAACCCCGTCGGCACCTACGATGATGGAGAGACTGTAATTCAACTCACTGAACCAGTAATTAGGCACTTCGTCTGTGGCCGATCAGGGCACTGTCAACAAGGACTGAAACTACAGGTTCAAGTTCTTGCACTGCCCAACGATGGAACTAGTGCTGGTCGTAGTCCACGACCAGGGCTCCCTCCAAGGAAACCTCCTCCTTCGCCTCGAAGATCTCCTCCTCCACCTTCTCGTGTGCCATCTTCTCCATCTTCTCTGCCATATCCTCCACCTGCTGCTGTACCTGCTGTACCTCTACCTGTTTCTGGTGTTGATAACATCGAGGTGGATACGCCAGGGTTGTTCCAGGGATTGGTGCTGCTGCTAGTGCTTTACTCTCTTACACTCGCTCTGGTTTGA 645 0.5209 MQGVRPGWAGKALVIIITSIFFRCVCASNHSVGGPSGWDLRSNLQLWSAATAFLVGDNLVFTYTPNHDVVEVSQLGYDTCVISNPVGTYDDGETVIQLTEPVIRHFVCGRSGHCQQGLKLQVQVLALPNDGTSAGRSPRPGLPPRKPPPSPRRSPPPPSRVPSSPSSLPYPPPAAVPAVPLPVSGVDNIEVDTPGLFQGLVLLLVLYSLTLALV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0387 214 SUPERFAMILY Cupredoxins 27 125 IPR008972 -
Lele46g0387 214 Pfam Plastocyanin-like domain 42 117 IPR003245 GO:0009055
Lele46g0387 214 MobiDBLite consensus disorder prediction 129 171 - -
Lele46g0387 214 Gene3D - 26 127 IPR008972 -
Lele46g0387 214 PANTHER BLUE COPPER PROTEIN 27 151 IPR039391 GO:0009055
Lele46g0387 214 ProSiteProfiles Phytocyanin domain profile. 28 126 IPR003245 GO:0009055
Lele46g0387 214 MobiDBLite consensus disorder prediction 140 171 - -
Lele46g0387 214 CDD Phytocyanin 29 124 - -
Lele46g0387 214 FunFam Blue copper 26 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0387 Lele-ChrLele46 2584211 2585283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0387 2 165 Miscellaneous Gene Families AT2G32300 37.500 1.07e-32 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0387 46 2584211 2585283 Lele46g0387 46 2584211 2585283 ECH
Lele46g0387 46 2584211 2585283 Lele47g1035 47 16188360 16189435 hybridization
Lele46g0387 46 2584211 2585283 Lele48g1101 48 15764486 15765608 hybridization