Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0360 ATGCAAGGAGTGAGACCAGGCTGGGCTGGTAAGGCTCTCGTTGTTATAATAATCACTTCGATATTTTTCCGATGCGTCTGTGCATCCAACCACTCCGTCGGCGGACCTTCCGGTTGGGACCTCCGTTCAAATCTCCAACTGTGGTCTGCGGCGACCACTTTTCTTGTTGGTGACAATCTAGTGTTCACATACACGCCGAACCACGACGTGGTGGAAGTTAGCCAGCTTGGTTATGACACCTGTGTAATATCCAACGCCATCGGCACCTACGATGATGGAGAGACTGTAATTCAACTCACTGAACCAGGAATTAGGCACTTCTTCTGTGGCCGATCAGGGCACTGTCAACAAGGACTCAAACTACAGGTCCAAGTTATTGCACCGCCCAACGATGGAACTAATATTGGTGGTCGTAGTCCACGACCCAGGCTCCCTCCAAGGAGACCTCCTCCTTCGCCTCGAAGATCTCCTCCTCCATCTTCTCCTCTGCCATATCCTCCACCTGCTGCGGTACCTGCTGTACATGTACATGTACCTGCACCTGCTTCTGGTGTTGATAACATCAAGGTGGATACGCCAGGGCTGTTCCAAGGATTGGTGGCGCTGGTAGTGCTTTACTCTCTTACACTCGCGCTGATTTGA 642 0.5156 MQGVRPGWAGKALVVIIITSIFFRCVCASNHSVGGPSGWDLRSNLQLWSAATTFLVGDNLVFTYTPNHDVVEVSQLGYDTCVISNAIGTYDDGETVIQLTEPGIRHFFCGRSGHCQQGLKLQVQVIAPPNDGTNIGGRSPRPRLPPRRPPPSPRRSPPPSSPLPYPPPAAVPAVHVHVPAPASGVDNIKVDTPGLFQGLVALVVLYSLTLALI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0360 213 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Lele45g0360 213 MobiDBLite consensus disorder prediction 130 168 - -
Lele45g0360 213 FunFam Blue copper 27 131 - -
Lele45g0360 213 Gene3D - 27 128 IPR008972 -
Lele45g0360 213 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Lele45g0360 213 PANTHER BLUE COPPER PROTEIN 28 156 IPR039391 GO:0009055
Lele45g0360 213 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Lele45g0360 213 CDD Phytocyanin 30 125 - -
Lele45g0360 213 MobiDBLite consensus disorder prediction 142 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0360 Lele-ChrLele45 2840380 2841439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0360 2 167 Miscellaneous Gene Families AT2G32300 36.686 3.33e-33 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0360 45 2840380 2841439 Lele45g0360 45 2840380 2841439 ECH
Lele45g0360 45 2840380 2841439 Lele47g1035 47 16188360 16189435 hybridization
Lele45g0360 45 2840380 2841439 Lele48g1101 48 15764486 15765608 hybridization