Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1066 ATGGCAGATCAGAACCAAAAACCAGAGCTCTTTGAGCTCAACAATGGGACAATGCATGTCCTCATCACCAATGTCGGCTGCGCGATCACTTCCTTGTCGGTGCCTGGCAAATATGGTGATTCAATCTCGCTCTCTCTGTTTTTTCGTTCAATTTTTATGGCGATAAATGTTCCTGACGCTTCTTTCTGTTTGGATTTTGAAGGAACCTTGTCCGACGTTGTTCTCGGGTTCGACTCTGTGGATCCATATCTGGTAAAATTGCGTAAACCCTTCTTGAGTTTCATATCTTCACTGATCATAAAGGGTCTTGCTCCTTATTTTGGGTGCATTGTGGGTCGGGTTGCGAACCGAATCAAACAGGGGAAGTTTACACTTGACGGGGTTCCATACTCCTTGCCTGTCAACAAGCCTCCAAACAGTCTCCATGGTGGTAACGTGGGGTTTGATAAGAAGGTGTGGCAGGTTATGGAATATAAGAAAGGGGAAACCCCTTCGATCACTTTCAAGTATCACAGCCATGATGGAGAGGAAGGTTATCCTGGGGACCTCACTGTTAATGCAACTTACACACTCACTTCTAAGACGACTTTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAGGCCACCCCAGTGAACTTAGCTCAGCATACATACTGGAACTTAGCAGGCCACAGCTCAGGGAACATTCTTGACCATTCAATTCAGATATTGGCCAATCATATTACTCCAGTGGATGAGAATATTGTACCAACTGGTGAAATTAAGCTAGTGAAGGATACCCCATTTGATTTTACATCTGAGAAGAGGATAGGCGACACCATTAATCAGGTTGGAATAGGATATGACCACAATTACGTGCTTGGGGGTGGTGATGAGAAGGAAGGTTTAAACCATGCTGCAAAAGTGAAGGATCCCACAAGTTCAAGGGTTTTGAACCTGTGGACAAATGCCCCTGGCATGCAATTCTACACAGGAAACTATGTCAATGGTGTTTCTGGAAAACAAGGTGCTGTTTATGGAAAGCATGCAGGGCTGTGCTTGGAGACACAGGGATTCCCTAATGCCATAAACCAGCCGAATTTCCCGTCTGTCGTGGTCCGACCCGGTCAAAAATACCAACATTCCATGTTGTTTGAGTTTTCAGTTGAGTGA 1155 0.4528 MADQNQKPELFELNNGTMHVLITNVGCAITSLSVPGKYGDSISLSLFFRSIFMAINVPDASFCLDFEGTLSDVVLGFDSVDPYLVKLRKPFLSFISSLIIKGLAPYFGCIVGRVANRIKQGKFTLDGVPYSLPVNKPPNSLHGGNVGFDKKVWQVMEYKKGETPSITFKYHSHDGEEGYPGDLTVNATYTLTSKTTLRLDMEGVPKDKATPVNLAQHTYWNLAGHSSGNILDHSIQILANHITPVDENIVPTGEIKLVKDTPFDFTSEKRIGDTINQVGIGYDHNYVLGGGDEKEGLNHAAKVKDPTSSRVLNLWTNAPGMQFYTGNYVNGVSGKQGAVYGKHAGLCLETQGFPNAINQPNFPSVVVRPGQKYQHSMLFEFSVE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1066 384 Pfam Aldose 1-epimerase 104 379 IPR008183 GO:0005975|GO:0016853
Lele48g1066 384 PIRSF GALM 1 384 IPR015443 GO:0016853|GO:0019318
Lele48g1066 384 PANTHER ALDOSE-1-EPIMERASE 7 383 - -
Lele48g1066 384 SUPERFAMILY Galactose mutarotase-like 4 382 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele48g1066 384 FunFam Aldose 1-epimerase 48 383 - -
Lele48g1066 384 CDD galactose_mutarotase_like 10 381 - -
Lele48g1066 384 Gene3D - 1 384 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1066 Lele-ChrLele48 15493438 15495502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g1066 6 382 Miscellaneous Gene Families AT3G47800 44.297 1.50e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1066 48 15493438 15495502 Lele48g1066 48 15493438 15495502 ECH
Lele45g0403 45 3142247 3149613 Lele48g1066 48 15493438 15495502 hybridization
Lele46g0422 46 2850392 2852529 Lele48g1066 48 15493438 15495502 hybridization