Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0422 ATGTCTATAGATAGCGTCCGTTCTGTTCGAGATTTTACCTTTTATTATTTAAATCGCTCAGACTCTTTCCATTCTCTCCCACACATCTCCTCAATGGCAGATCAGGACCAAAAACCAGAGCTCTTTGAGCTTAACAATGGGACAATGCATGTCCTCATCACCAATGTCGGCTGCACGATCACTTCCTTGTCGGTGCCTGGCAAATATGGAACCTTGTCCGACGTAGTTCTCGGGTTCGACTCTGTGGATCCATATCTGAAAGGTCTTGCTCCTTATTTTGGGTGCATTGTGGGTCGGGTTGCGAACAGAATCAAAGAGGGGAAGTTTACACTTGACGGGGTTCAATACTCTTTGCCTGTCAACAAGCCTCCAAACAGTCTCCATGGGGGTAACGTGGGGTTTGATAAGAAGGTGTGGCAGGTTATGGAATATAAGAAAGGGGAAACCCCTTCGATCACTTTCAAGTATCACAGCCATGATGGGGAGGAAGGTTATCCTGGGGACCTCACTGTTACTGCAACTTACACACTCACTTCTAAGACGACTTTGAGGCTTGACATGGAAGGAGTGTCAAAGGACAAGGCCACCCCAGTGAACTTAGCTCAGCATACATACTGGAACTTAGCAGGCCACAGCTCAGGGAACATTCTTGACCATTCAATTCAGATATGGGCTAATCATATTACTCCAGTGGATGAGAATATTGTACCAACTGGTGAAATTAAGCCAGTGAAGGATACCCCATTTGATTTTACATCTGAGAAGAGGATAGGCGAAACCATTAATCAGGTTGGAATAGGATATGACCACAATTACGTGCTTGGGGGTGGCGATGAGAAGGAAGGTTTAAAACATGCTGCAAAAGTGAAGGATCCCTCAAGTTCAAGGGTTTTGAACCTGTGGACAAATGCCCCTGGCATGCAATTCTACACTGGAAACTACGTCAATGGTGTTTCTGGAAAACAAGGTGCTGTTTATGGAAAGCATGCAGGGCTGTGCTTGGAGACACAGGGATTCCCTAATGCCATAAACCAGCCGAATTTTGCGTCTGTGGTCGTCCGACCCGGTCAAAAATACCAACATTCCATGTTGTTTGAGTTTTCAGTTGAGTGA 1113 0.4564 MSIDSVRSVRDFTFYYLNRSDSFHSLPHISSMADQDQKPELFELNNGTMHVLITNVGCTITSLSVPGKYGTLSDVVLGFDSVDPYLKGLAPYFGCIVGRVANRIKEGKFTLDGVQYSLPVNKPPNSLHGGNVGFDKKVWQVMEYKKGETPSITFKYHSHDGEEGYPGDLTVTATYTLTSKTTLRLDMEGVSKDKATPVNLAQHTYWNLAGHSSGNILDHSIQIWANHITPVDENIVPTGEIKPVKDTPFDFTSEKRIGETINQVGIGYDHNYVLGGGDEKEGLKHAAKVKDPSSSRVLNLWTNAPGMQFYTGNYVNGVSGKQGAVYGKHAGLCLETQGFPNAINQPNFASVVVRPGQKYQHSMLFEFSVE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0422 370 PIRSF GALM 27 370 IPR015443 GO:0016853|GO:0019318
Lele46g0422 370 Gene3D - 28 370 IPR014718 GO:0030246
Lele46g0422 370 SUPERFAMILY Galactose mutarotase-like 32 368 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele46g0422 370 FunFam Aldose 1-epimerase 33 369 - -
Lele46g0422 370 PANTHER ALDOSE-1-EPIMERASE 38 369 - -
Lele46g0422 370 Pfam Aldose 1-epimerase 41 365 IPR008183 GO:0005975|GO:0016853
Lele46g0422 370 CDD galactose_mutarotase_like 41 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0422 Lele-ChrLele46 2850392 2852529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0422 37 368 Miscellaneous Gene Families AT3G47800 49.398 8.29e-107 316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0422 46 2850392 2852529 Lele46g0422 46 2850392 2852529 ECH
Lele46g0422 46 2850392 2852529 Lele47g1001 47 15945111 15947215 hybridization
Lele46g0422 46 2850392 2852529 Lele48g1066 48 15493438 15495502 hybridization