Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0403 ATGATCGCCGACGTTGATTGTCTGTGTAATGTGTTTAATAGCCCGGAGAAGCTTCAATCCATGAACGCTACCAGGGATGATGCCATGAAACTTCCCAAGTCTTGTGGTTTAGACACAGATGTTTCCCAATGCCACAAAGAGAAAACTGGCGATAGAGATAATCTAACATCTATAGATAGCGTCCGTTTCGGTTTCGGTTTCGAGATTTCACATATTATTAAATCGCTGAGCCTCTTTCCATTCGAACTCTCGCACACAGCTCCAATGGCAGATCAGAACCAAAAACCAGAGCTCTTTGAGCTAAACAATGGGACAATGCATGTCCTCATCACCAATGTCGGCTGCACGATCACTTCCTTATCGGTGCCTGGCAAAGATGGAACCTTGTCTGACGTTGTTCTTGGGTTCGACTCTGTGGATCCATATCTGAAAGGGCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCGAACAGAATCAAAGAGGGGAAGTTTACACTTGATGGGGTTCAATACTCTTTGCCTGTCAACAAGCCTCCAAACAGTCTCCATGGTGGCAACGTGGGGTTTGATAAGAAGGTGTGGCAGGTTATTGAGTATAAGAAAGGTGAAACCCCTTCCATCACTTTCAAGTATGAAAGCCATGATGGAGAGGAAGGTTATCCTGGGGAGCTTACTGTTACTGCAACTTATTCCCTTACTTCTAAGACAACTCTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAGCCCACTATAGTGAACTTAGCTCAGCATACATACTGGAACTTAGCAGGCCACAGCTCGGGGAGCATTCTTGACCATTCAATTCAGATATGGGCTAATCACATCACTCCTGTGGATGAAAATATTGTACCAACTGGTGAAATTAAGCCTGTGAAGGATACCCCATTTGATTTTACATATGAGAAGAGGATCGGCGACACCATTGGTCAGGTTGGAATAGGATACGACCACAATTACGTGCTTGGAGGCGGCGATGAGAAGGAAGGTTTAAAACAAGCTGCAAAAGTGAAGGATCCCTCAAGTTCCAGGGTTTTGAATCTGTGGACAAATGCCCCGGGCATGCAATTCTACACTGGAAATTATGTCAATGGTGTTTCTGGAAAACAAGGTGCTGTTTATGAAAAGCATGCAGGACTGTGCTTGGAGACACAGGGGTTCCCTAATGCCATAAACCAGCCGAATTTCCCGTCCGTTGTCGTCCGACCCGGTCAGAAATACCAGCATTCCATGTTGTTTGAGTTTTCAGTTGAGTGA 1284 0.4556 MIADVDCLCNVFNSPEKLQSMNATRDDAMKLPKSCGLDTDVSQCHKEKTGDRDNLTSIDSVRFGFGFEISHIIKSLSLFPFELSHTAPMADQNQKPELFELNNGTMHVLITNVGCTITSLSVPGKDGTLSDVVLGFDSVDPYLKGLAPYFGCIVGRVANRIKEGKFTLDGVQYSLPVNKPPNSLHGGNVGFDKKVWQVIEYKKGETPSITFKYESHDGEEGYPGELTVTATYSLTSKTTLRLDMEGVPKDKPTIVNLAQHTYWNLAGHSSGSILDHSIQIWANHITPVDENIVPTGEIKPVKDTPFDFTYEKRIGDTIGQVGIGYDHNYVLGGGDEKEGLKQAAKVKDPSSSRVLNLWTNAPGMQFYTGNYVNGVSGKQGAVYEKHAGLCLETQGFPNAINQPNFPSVVVRPGQKYQHSMLFEFSVE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0403 427 CDD galactose_mutarotase_like 98 424 - -
Lele45g0403 427 Gene3D - 84 427 IPR014718 GO:0030246
Lele45g0403 427 SUPERFAMILY Galactose mutarotase-like 89 425 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele45g0403 427 FunFam Aldose 1-epimerase 90 426 - -
Lele45g0403 427 Gene3D - 2 43 IPR036312 -
Lele45g0403 427 Pfam Aldose 1-epimerase 98 422 IPR008183 GO:0005975|GO:0016853
Lele45g0403 427 Pfam Probable lipid transfer 3 44 IPR016140 -
Lele45g0403 427 PANTHER ALDOSE-1-EPIMERASE 95 426 - -
Lele45g0403 427 CDD AAI_LTSS 4 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0403 Lele-ChrLele45 3142247 3149613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0403 94 427 Miscellaneous Gene Families AT3G47800 49.701 1.25e-107 320
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0403 45 3142247 3149613 Lele45g0403 45 3142247 3149613 ECH
Lele45g0403 45 3142247 3149613 Lele47g1001 47 15945111 15947215 hybridization
Lele45g0403 45 3142247 3149613 Lele48g1066 48 15493438 15495502 hybridization