Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1065 ATGACATGTTTATATGTAGATTTTGAGGATGATATTAACAACCTTAAATGCTTTTTGTATCCTGAGAAAATAGAGAAGCTTCCGAGTTTGGAAAATCAAGTGGTTTCCACAGGACAGGAGGACCAAATTACACACGAGATCAAATTTGATACCGTGTTCTGCATGTACCATATCAATTTCTCTTGCCCAAGATTTAACAAGATAAGTTATGTTTTACTGCTACAAGGGAATATAATAGGGGGATGGAGCAATTCCAAATGCAACAATTATGCAGACAAGTTCTCTGTCGTCGTTGCTATGTCAATTGAGCTCAAACTCTCACGTTCCAATCGTATCTATCGCCCTTCGGAAACTCTGGATGGCAAAATCATCGTAAAGACTCAGTCTCCAATTTCTCACAATGGGGTTCGTGTTACTGTCAAAGGATCCGTCAACATGCAGGTTCGCGGAGGGTCAGCTGGGGTTATCGAGTCGTACTATGGAGTTATTAAGCCAATCCCCATTGTGAAGAGGACAGTTGAAGTCGGTTCTTCTGGAAAGATTGGTCCAGGTACAACAGAGATACCATTCTCAGTTAATCTGAGACAGCCCGTCAAGGATTTAGAAAGGTTCTATGAGACTTTCCATGGTTCAAATATCAATATTCAGTATATGGTCACTGCAGATATAACTCGTGGATACTTGCATAAATCTTTATCAACCACAATGGAATTCATCGTTGAAAATGATAGAGTTGATCTGCTACAACGTCCAATTTCACCAGAAATGGTCATCTTCTACATTACCCAAGACACCCAAAGGCATGCTCTACTACATGAATTAAAGTCAGGTGGGTTTCGGGTGACTGGAAAAGTCTGTACTCAGTGCTCTTTATCCGATCCTATCAGTGGTGAGCTAACAGTAGAAGCATCCGCGGTTCCAATCCAATCCATTGAGCTTCACTTGTTTCGTGTTGAATCCGTTCTTGTTGGGGAGAAAATCGCAACTGAAACAACCCTGATTCAAACTACCCAGATTGCAGATGGAGATATATGCCGCAACATGACTCTGCCTATCCATGTAATACTTCCCCGTCTCTTGACGTGTCCGACAATCTTAGCTGGTCCATTCTCAATTGAGTTCAAAATCTCCATTGTTATAAGCTTCAAGTCAGAGTTTTCTAAATCACAAACAAAGGTTGATCCTAGAACTCCAAGGCTGTGGCTGGCAATGGAAACATTGCCACTTGAGTTAGCTCGGACAAAGTGA 1248 0.4151 MTCLYVDFEDDINNLKCFLYPEKIEKLPSLENQVVSTGQEDQITHEIKFDTVFCMYHINFSCPRFNKISYVLLLQGNIIGGWSNSKCNNYADKFSVVVAMSIELKLSRSNRIYRPSETLDGKIIVKTQSPISHNGVRVTVKGSVNMQVRGGSAGVIESYYGVIKPIPIVKRTVEVGSSGKIGPGTTEIPFSVNLRQPVKDLERFYETFHGSNINIQYMVTADITRGYLHKSLSTTMEFIVENDRVDLLQRPISPEMVIFYITQDTQRHALLHELKSGGFRVTGKVCTQCSLSDPISGELTVEASAVPIQSIELHLFRVESVLVGEKIATETTLIQTTQIADGDICRNMTLPIHVILPRLLTCPTILAGPFSIEFKISIVISFKSEFSKSQTKVDPRTPRLWLAMETLPLELARTK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1065 415 FunFam Down syndrome critical region protein 3 100 243 - -
Lele48g1065 415 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 107 388 IPR028934 GO:0006886
Lele48g1065 415 FunFam Vacuolar protein sorting-associated protein 26 282 389 - -
Lele48g1065 415 Pfam Vacuolar protein sorting-associated protein 26 104 380 IPR028934 GO:0006886
Lele48g1065 415 Gene3D - 285 393 IPR014752 -
Lele48g1065 415 SUPERFAMILY E set domains 102 270 IPR014756 -
Lele48g1065 415 Gene3D - 89 243 IPR014752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1065 Lele-ChrLele48 15487549 15492572 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1065 48 15487549 15492572 Lele48g1065 48 15487549 15492572 ECH
Lele45g0404 45 3151166 3154742 Lele48g1065 48 15487549 15492572 hybridization
Lele46g0423 46 2853700 2868889 Lele48g1065 48 15487549 15492572 hybridization