Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0404 ATGTCAGTTGAGCTCAAACTCTCACGTTCCAATCGTATCTATCGCCCTTCGGCAAGACTCAGACCGCGTTTTCTCTCTTTGCAAAATCATACTCAGTCTGCAATTTCTCACAATGGAGTTCGTGTTACTATCAAAGGATCCGTCAACATGCAGGTTCGCGGAGGATCAGCTGGAGTTATTGAGTCGTACTATGGAGTTATTAAGCCAATCCCCATTGTGAAGAGGACCGTTGAAGTTGGTTCTTCTGGAAAGATTGGTCCAGGTACAACAGAGATCCCATTCTCAGTGATTCTGAGACAGCCTGGCAAGGATTTAGAAAGATTCTATGAGACTTTCCATGGTTCAAACATCAATATTCAGTCTGTACTCAGTGCTCTATCGGATCCTATCAGTGGTGAGCTAACAGTAGAAGCATCTGCAGTTCCAATTCAATCCATTGACCTTCACTTGTTTCATATCGCAGATGGAGATATATGCCGTAAGTTGACTCTTCCTATCCATGTAATACTTCCCCGTCTGTTGACGTGTCCGACAATCTTAGCTGGTCCATTCTCAATTGAGTTCAAAATCTCCGTTGTTATAAGCTTCAAGTCAGAGTTTCCTAAATCACAAACAAAGGTTGATCCTAGAACTCCAAGACTGCGGCTGGCAATGGAAACGTTGCCACTTGAGCTAGTTCGGACGAAGTGA 690 0.4377 MSVELKLSRSNRIYRPSARLRPRFLSLQNHTQSAISHNGVRVTIKGSVNMQVRGGSAGVIESYYGVIKPIPIVKRTVEVGSSGKIGPGTTEIPFSVILRQPGKDLERFYETFHGSNINIQSVLSALSDPISGELTVEASAVPIQSIDLHLFHIADGDICRKLTLPIHVILPRLLTCPTILAGPFSIEFKISVVISFKSEFPKSQTKVDPRTPRLRLAMETLPLELVRTK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0404 229 Gene3D - 147 205 IPR014752 -
Lele45g0404 229 Gene3D - 2 137 IPR014752 -
Lele45g0404 229 Pfam Vacuolar protein sorting-associated protein 26 138 194 IPR028934 GO:0006886
Lele45g0404 229 Pfam Vacuolar protein sorting-associated protein 26 26 123 IPR028934 GO:0006886
Lele45g0404 229 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 30 123 IPR028934 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0404 Lele-ChrLele45 3151166 3154742 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0404 45 3151166 3154742 Lele45g0404 45 3151166 3154742 ECH
Lele45g0404 45 3151166 3154742 Lele47g1000 47 15940945 15943913 hybridization
Lele45g0404 45 3151166 3154742 Lele48g1065 48 15487549 15492572 hybridization