Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0107 ATGGCAAGCAAACGCCTCTTACCTCAAAGTCCCTTTCTTCAAAATCCTCTCCGAAAGAATCCTTGCACATCATGGCCTCCTCAATCTTACACTACCTTGTCGACCAATCACCTACTTCCCTACACCTTATCACCTTCCTCTCACGTTTCTGCTTTCCCTTCAAATTTGTGCCTTAAAACTTCGACGACGCATCGCAATTGGATCGTGCCCTCTTGCGTTTATAGGACTCAAGAGCTCATTGATGATGGCCGCGAAACTTCACTTGAGAATGAAGATCACGTGGAAGAGAATTCTCGAGAAGAAGAAGATGGAATGGTGGGGAAGATTGAGAAGCAGAAACTGGCCGACCAGAGTATGTGGGGTCAGATGAAGGAAATCATCAAGTTTACTGGACCAGCAACGGGGCTTTGGATATGCGGACCACTAATGAGTCTCATTGATACGGCTGTTATTGGTCAGGGAAGCTCGATTGAGCTAGCTGCCTTAGGCCCTGCTACAGTTGTTTGTGATTACATGAGTTACGTGTTCATGTTTCTCTCGATTGCTACTTCTAATATGGTCGCTACTGCTCTTGCTAAGCAGGATAGAGATGAAGTACAGCATCACATATCTGTCTTGCTTTTTGTTGGGCTAGCTTGTGGCTTCGTGATGCTTTTGTTTACACGATTGTTTGGTGCAGCAACACTCACGGCTTTTACTGGGTCAAAGAATTTACATGTGGTACCTGCAGCAAACACTTATGTGCAGATTCGAGGCTTGGCGTGGCCAGCATTACTAGTTGGCTGGGTTGCTCAAAGTGCTAGTCTTGGAATGAAAGATTCCTGGGGACCCTTGAAGGCTTTAGCTGCTGCTAGTGTTATAAATGGTGTTGGTGATATAGTTTTGTGCATCTTTTTAGGCTATGGCATTGCTGGGGCTGCTTGGGCTACAATGGCTTCACAAGTTGTTGCTGCATACATGATGATTCAGACTCTAAATGAGAAGGGATACAATGCATTTGCCTTCTCTGTCCCTTCTGTCCAGGAGATTTGGACAATACTTGGGCTTGCTGCTCCTGTATTTTTGACAATGATGTCGAAGGTGGCTTTCTACTCATTGCTTATATATTTTGCTACATCAATGGGCACACATACAATGGCTGCTCATCAAGTCATGGTTCAAACCTTCTGCATGTGTGCAGTGTGGGGTGAGCCTCTCTCTCAAACTGCCCAATCATTTATGCCTGAATTGATATGTGGTGCCAATCGGAGCTTGAAAAAGGCTAGAATACTTCTGAAGTCTCTTGTCATAATTGGAGCTACACTCGGATTTCTGCTAGGAATTGTTGGAACATCAGTTGCTTGGCTATTCCCCAACATTTTTACGCCTGATCAGATGGTCATCCAGGAGATGCACAAGGTGCTGATTCCATACTTCATAGCACTAGCTGTGACACCCCCTGCCCACAGCCTTGAAGGAACATTGCTGGCTGGACGGGATCTAAGATTTATAAGTCTGTCAATGAGTGGATGCTTTACTTTAGGTGCACTTGTATTACTGATGTTGAGTGGTAGATTTGGCTTGCAAGGCTGTTGGTTTGCACTCGCAGGATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTTCTTTCTCCCAGTGGCATGTTATACTCTGAAGAATTTGGTCAGTATAAGCAGAAAAAACTAAGGACTGCATAG 1701 0.4521 MASKRLLPQSPFLQNPLRKNPCTSWPPQSYTTLSTNHLLPYTLSPSSHVSAFPSNLCLKTSTTHRNWIVPSCVYRTQELIDDGRETSLENEDHVEENSREEEDGMVGKIEKQKLADQSMWGQMKEIIKFTGPATGLWICGPLMSLIDTAVIGQGSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDRDEVQHHISVLLFVGLACGFVMLLFTRLFGAATLTAFTGSKNLHVVPAANTYVQIRGLAWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGVGDIVLCIFLGYGIAGAAWATMASQVVAAYMMIQTLNEKGYNAFAFSVPSVQEIWTILGLAAPVFLTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTFCMCAVWGEPLSQTAQSFMPELICGANRSLKKARILLKSLVIIGATLGFLLGIVGTSVAWLFPNIFTPDQMVIQEMHKVLIPYFIALAVTPPAHSLEGTLLAGRDLRFISLSMSGCFTLGALVLLMLSGRFGLQGCWFALAGFQWARFSMALQRLLSPSGMLYSEEFGQYKQKKLRTA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0107 566 TIGRFAM matE: MATE efflux family protein 134 525 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele48g0107 566 MobiDBLite consensus disorder prediction 8 23 - -
Lele48g0107 566 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 74 548 IPR044644 -
Lele48g0107 566 CDD MATE_DinF_like 122 536 IPR044644 -
Lele48g0107 566 MobiDBLite consensus disorder prediction 84 103 - -
Lele48g0107 566 MobiDBLite consensus disorder prediction 1 23 - -
Lele48g0107 566 Pfam MatE 140 291 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0107 Lele-ChrLele48 1468116 1472431 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1309 45 22868483 22873052 Lele48g0107 48 1468116 1472431 hybridization
Lele46g1409 46 20899559 20904473 Lele48g0107 48 1468116 1472431 hybridization