Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1309 ATGCAGTTCCAATGCCTTTCCCTCCCTTCCCCAATTCCCGTTCGAAATCCTAATTTCCGACGACTCTCTCAATCTTCTCTCCACTTCAACTTCTCCGATTCTCACTCTACAACCTCCGGTTTTCCTCTCAGTTTTCGGAGTTCACCGTTGGAAATTCGTAATTGTAAGTTAGTAAGATCTTTCATTAAAAATGGTGATGGAATTTCTGGAAGCAATCCCGAAGCTCGAAGTAAGTGTAATTGTAGTTCCGAGTCAGTTTCTTGGTCCGAAGGTGAAGAGGAGACAGTGGAGGTTGATATAAGTAAGAATCGGGCATTGACTAATCAGAGCATATTGTCGCAAATAAAGGAGATTATAATGTTTTCAGGACCAGCCACTGGGCTCTGGATCTGTGCGCCGTTGATGAGTCTCATCTCAACCGCTGTGGTTGGTAGAGGAAGCTCAACCGAGCTTGCTGCTTTAGGGCCGGGGACGGTGTTTTGCGATAACATGAATCTACTGTTCATGTTCCTTTCCATTGCAACTTCAAATATGGTTGCTACTTCACTTGCCAAAGGGGACAAAGATGAAGTGCAGCACCAAATATCGGTTTTACTTTTTGTTGGCTTGATATGTGGGACGTTGATGCTTTTGTTTACACAATTTCTTGGTGGATGGGCATTAACTGCTTTTACTGGGCCAAAAAATATTCAAATTGTACCTGCGGCAAGCAAATATGTTCAGATTCGAGGTTTAGCATGGCCTGCTGTTCTCTATGGACTGGTTGCTCAAAGTGCAAGCCTTGGTATGAGAGATTCATGGGGACCTCTGAAGGCTTTGGTCATTGCTAGTGCTGTTAATGGCATTGGTCATGTAATCCTATGCAGTTTTCTTCAGTATGGTCTTGCAGGTGCAGCATGGGCAACACTGGCATCCCAAATGGTAGCAGCCTATATGATGGTTGGAGCGCTAAACAAGAAAGGATATAATTCTTTTGCCATCTCAGTACCATCACCCTCTGAATCTTTGCAAATATTTGGGATTGCTGCGCCTGTATTCGTGACCATGTTCTCAAAGGTGGCGTTTTACTCTCTCATAACATATTTTGCTACAGCAATGGGTACTAATACGGTTGCAGCTCATCAGGTCATGATTCAAATGTATAGCATGTGTGTGGTATGGGGGGAGCCACTCTCTCAAACTGCGCAGTCTTTTATGCCCGAGTTACTATATGGTTTCAACCGAAGTTTGGTAAAGGCTCAAAATCTGCTGAAGTCACTGCTGATTATTGGAACTTTACTTGGATTAGTAATAGCAACAATTGGAACGTCTGTTCCTTGGTTGTTGCCGAATATTTTTACACCTGATCTTAAGGTTATACAAGAGATGCACAATGTGTTGTTAATGTTCTTCGTAGCATTATCGGTGACGCCCTGTACTCACAGCCTTGAGGGTACACTATTGGCTGGCAGGGACCTTCAATTTATTAGCTTAACAATGAGTGGATGCTTCGGTCTTGGTGCCCTCTTACTATGGCTTGTGAGTACTAAAGGGTATGGTTTGCCTGGCTGCTGGTGCGCTCTTGTTGGATTTCAATGGGCTCGATTCTTCCTTGCTCTATGGCGTCTTCTCTCTCCTAATGGCATGCTCAACTCCAAGGAAAACCAGTTGGAATTGGAAAAATTAAAAGCTGCTTAG 1677 0.4377 MQFQCLSLPSPIPVRNPNFRRLSQSSLHFNFSDSHSTTSGFPLSFRSSPLEIRNCKLVRSFIKNGDGISGSNPEARSKCNCSSESVSWSEGEEETVEVDISKNRALTNQSILSQIKEIIMFSGPATGLWICAPLMSLISTAVVGRGSSTELAALGPGTVFCDNMNLLFMFLSIATSNMVATSLAKGDKDEVQHQISVLLFVGLICGTLMLLFTQFLGGWALTAFTGPKNIQIVPAASKYVQIRGLAWPAVLYGLVAQSASLGMRDSWGPLKALVIASAVNGIGHVILCSFLQYGLAGAAWATLASQMVAAYMMVGALNKKGYNSFAISVPSPSESLQIFGIAAPVFVTMFSKVAFYSLITYFATAMGTNTVAAHQVMIQMYSMCVVWGEPLSQTAQSFMPELLYGFNRSLVKAQNLLKSLLIIGTLLGLVIATIGTSVPWLLPNIFTPDLKVIQEMHNVLLMFFVALSVTPCTHSLEGTLLAGRDLQFISLTMSGCFGLGALLLWLVSTKGYGLPGCWCALVGFQWARFFLALWRLLSPNGMLNSKENQLELEKLKAA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1309 558 Pfam MatE 130 280 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele45g1309 558 Coils Coil 545 558 - -
Lele45g1309 558 CDD MATE_DinF_like 116 538 IPR044644 -
Lele45g1309 558 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 77 541 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1309 Lele-ChrLele45 22868483 22873052 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1309 45 22868483 22873052 Lele47g0099 47 728131 735220 hybridization
Lele45g1309 45 22868483 22873052 Lele48g0107 48 1468116 1472431 hybridization