Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1409 ATGCAGTTCAAATCCCTTTCCCTCCCTTCCCCAATTCCCGTTCGAAATCCTAATTTCCGGCGATTCTCTCAATCTTCTCTCCACTTCAACCTCTCCGATTCTCACTCTAAACCCTCCGGTTTTCCTCTCAGTTTTCGGAGTTCACTGTTGGAAATTCGTAATCGTAAGTTAGTAAGACCTTTCATTCAAAACGGTGATGGAGTTTCTGGAAGCAATCCAGAAGCTCGGAATAATTGTAATTGTAGTTCAGAGTCAGCTTCGTGGTCCGAAGATGAAGAGGAGGCAGTGGAGGTTGACGTAAGTAAGAGTCAGGCATTGACTAATCAGAGCATATTGTCGCAAATAAAGGAGATTATAATGTTTTCTGGGCCTGCTACTGGGCTCTGGATCTGTGCGCCGTTGATGAGTCTCATCTCAACCGCTGTGGTTGGTCGAGGAAGCTCTACTGAGCTTGCTGCTTTAGGGCCGGGGACGGTGTTTTGCGATAACATGAATCTATTGTTCATGTTCCTTTCCATTGCAACTTCAAATGTGGTTGCTACTTCACTTGCCAAAGGGGACAAAGACGAAGTGCAGCACCAAATATCCGTTTTACTTTTTGTTGGCTTGATATGCGGGACATTGATGCTTTTGTTTACACAATTTCTTGGTGCATGGGCATTAACTGCTTTTACCGGGCCAAAAAATATTCAAATTGTTCCAGCTGCAAGCAAATATGTTCAGATTCGAGGTTTAGCATGGCCTGCTGTTCTCTATGGACTGGTTGCTCAAAGTGCAAGCCTTGGGATGAAAGATTCATGGGGACCTCTGAAGGCTTTGGTCATTGCTAGTGCTGTTAATGGCATTGGTCATGTAGTCCTATGCAGTTTTCTTCAGTATGGTCTTGCAGGTGCAGCATGGGCAACACTGGCATCCCAAATTGTAGCAGCTTATATGATGATTGGAGCGCTAAACAAGAAAGGATTTAATTCTTTTGCCATCTCAGTACCATCACCCTCTGAATCTCTGCAAATATTTGGGATTGCTGCGCCTGTATTTGTGACCATGTTCTCAAAGGTGGCATTTTACTCTCTCATAACATATTTTGCTACAGCAATGGGTACTAATACGGTTGCAGCCCATCAGGTCATGATTCAAATGTATAGCATGTGTGTGGTATGGGGGGAGCCACTCTCTCAAACTGCACAGTCTTTTATGCCCGAGTTACTCTATGGTTTCAACCGAAGTTTGTTAAAGGCTCAAAATCTGCTGAAGTCACTACTGATTATTGGAACTTTACTTGGATTAGTAATAGCAACAATTGGAACATCTGTTCCTTCGTTGTTGCCAAATATTTTTACACCTGATCTTAAGGTCATACAAGAGATGCACAATGTGTTGTTAATGTTCTTTGTTGCATTATCGGTGACGCCCTGTACTCACAGCCTTGAGGGTACTCTATTGGCTGGCAGGGACCTTAAATTTATTAGCTTAACAATGAGCGGATGCTTCGGTCTTGGTGCCCTCTTACTATGGCTTGTGAGTACTAAAGGATATGGTTTGCCTGGCTGCTGGTGCGCTCTTGTTGGGTTTCAATGGGCTCGATTCTTCCTTGCTCTATGGCGTCTTCTATCTCCTAATGGCATGCTCAACTCCCAGGAAAACCGGTTTGAATTGGATAAATTGAAAGCTGCTTAG 1677 0.4383 MQFKSLSLPSPIPVRNPNFRRFSQSSLHFNLSDSHSKPSGFPLSFRSSLLEIRNRKLVRPFIQNGDGVSGSNPEARNNCNCSSESASWSEDEEEAVEVDVSKSQALTNQSILSQIKEIIMFSGPATGLWICAPLMSLISTAVVGRGSSTELAALGPGTVFCDNMNLLFMFLSIATSNVVATSLAKGDKDEVQHQISVLLFVGLICGTLMLLFTQFLGAWALTAFTGPKNIQIVPAASKYVQIRGLAWPAVLYGLVAQSASLGMKDSWGPLKALVIASAVNGIGHVVLCSFLQYGLAGAAWATLASQIVAAYMMIGALNKKGFNSFAISVPSPSESLQIFGIAAPVFVTMFSKVAFYSLITYFATAMGTNTVAAHQVMIQMYSMCVVWGEPLSQTAQSFMPELLYGFNRSLLKAQNLLKSLLIIGTLLGLVIATIGTSVPSLLPNIFTPDLKVIQEMHNVLLMFFVALSVTPCTHSLEGTLLAGRDLKFISLTMSGCFGLGALLLWLVSTKGYGLPGCWCALVGFQWARFFLALWRLLSPNGMLNSQENRFELDKLKAA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1409 558 MobiDBLite consensus disorder prediction 65 86 - -
Lele46g1409 558 TIGRFAM matE: MATE efflux family protein 124 518 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele46g1409 558 CDD MATE_DinF_like 116 538 IPR044644 -
Lele46g1409 558 MobiDBLite consensus disorder prediction 64 88 - -
Lele46g1409 558 Pfam MatE 130 280 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele46g1409 558 Pfam MatE 344 505 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele46g1409 558 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 76 542 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1409 Lele-ChrLele46 20899559 20904473 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1409 46 20899559 20904473 Lele47g0099 47 728131 735220 hybridization
Lele46g1409 46 20899559 20904473 Lele48g0107 48 1468116 1472431 hybridization