Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1110 ATGCCCCAAAACGAAACCCACTGTCAACTTGGTGCACTTACCACAAGCTCAACTTCATATGAGAGCCCCGTTCTCACCTTGAATCTTAGAGAACCAGAGAAGCCCAATATCAACATCAATTCCAGCTCCGTTTGTGCAATGACTTCCACGAACTCAATATCCACTGACCCTCTTCCTTCCGCCGTGGTCGCGGTCGACGACATCGCCGTCAAGGCTGTGAACAAGCGCTACGAAGGCTTGGTCACTGTGCGTACCAAAGCCTTAAAGGGTAAAGGAGCTTGGTACTGGGTGCATTTGGAGCCTATTCTGATTCGGAACTCCGATTCTGGCCTTCCTAAATCCGTGAAGCTCAAATGTTCCTTATGTGACTCCGTTTTCTCCGCTTCAAATCCGTCGAGAACTGCTTCGGAGCACTTGAAGAGAGGAACATGCCCCAATTTCAGCTCTGGTTTGAGACCCAATTCTTCAATTTCGCCTATGCCCATATCTACTGTGGCTTTGCCTTATTCAAACAATCACAACAGCAAAAAGAGAAGCTCTCCTCACATGGCTGTTACTTCTCCTTATCAAAATCATTCCTTAGCCTTGGTTGAGTCCTCTCGATTTTGTAGTGAACTGGGATTCTCACCAACCCAACTTAACACGGGGACAAATCAACAACATTTGATATTGTCGGGTGGTAAGGAAGATTTATGTGCATTGGCCATGTTTGAAGACAGTGTGAAGAGGCTCAAGAGTCCCAAGACCTCTCCTTGTCCTGCTTTGAGCAGGGAACAGATTAACTCTGCTCTAGAATTGCTTGCCGATTGGTTCTACGAGTCATGTTGGTCTGTGTCTTTATCAACCCTTGAGCACCCAAAGTTTCAAGCCTTTCTCAACCAAGTGGGTCTGCCAACAAATTTGAGTCGTGAGATATCAGGTCCTCGACTTGATGCTAAGTTCAATGAGGCCGAGACTCAGTCAGAAGCCAAAATACGAGATGCAATGTTTTTTCAAGTAGCTAGCGAAGGTTGGAAGAACAATAATTGGTATAGCTTGTGTTGTGGAGGTGACAATTTGGTTAAGTTTACTGTGAATCTTCCGAACGGAGCTAGTGTGTTCCAAAAGGCTATCTTTACTGGGGGAGTTGTGTCTCCCAAGTATGCAGAGGAGATTTTGTGGGAAACAGTCACGAGTATAAGTGGGAGTTCCGTGCAGAGATGTGCAGGAATTGTAGCAGACAAATATAAGGCCAAAGCATTAAGGAACTTGGAGATTCAAAATCATTGGATGGTAAATATCCCTTGTCAGCTTCAGGGCTTCATTAGTTTAATCAAGGATTTTAACGACGACCTCCCACTTTTCAGGGTTGTCACTGAAAATTGCTTAAAGCTTGCAAATTTTGTAAACAATGAATCCCATGTTAGAAATAGTTTTCTCAAGTTCCGGATGCAGGAGCTTGAGTATTCTGGGTTGCTTCGTGTTCCTTCACCCAAATGTGATCCTCTTAAGAACTTTGCATCCGTCTTTCCAATGTTGGAGGATATCTTGAGCTGTGCTAGAGTGATCCAAATGGTTATGTTGGAGAACTCGTTTAAGGTAACGTGCATGGAGGATCCACTAGCGAGGGAAGTTGCTGAAATGACTCAAAGTGATCGGTTTTGGAATGAATTGGAGGCAGTTTATTCACTTGTAAAACTCATCAAAGGAATGGTTCGTGACATGGAGGTTGAGAGACCACTGATTGGTCGATGCCTTCCTCTTTGGGAGGAGCTGAGAACCAAAGTGAAGGAGTGGTGTGCAAAATTTAGCGTAGTGGAAGGACCTGTGGAGAAAATACTTGAAAAGAGGTTCAGAAAAAATTATCACCCTGCATGGTCAGCTGCATTTATTCTCGACCCACTCTACTTGATTAAAGATACAAGTGGAAAGTACCTTCCCCCATTCAAATGCTTGACACGTGAACAAGAGAAAGATGTGGATAAGCTATTGACAAGGCTAGCTTCTAAAGAAGAAGCTCATATTGTGTTAATGGAGCTCATGAAGTGGAGGTCAGAAGGGCTGGACCCACTCTATGCTCAGGCTGTTCAAATGAAACAAAAGGATCCGGTGACTGGGAAGATGAAAGTTGCAAACCCATTGAGTAGTAGACTTGTTTGGGAAACTTGCTTAAGTGAGTTTAAATCCCTGGGGAAGATTGCAGTAAGGCTTATTTTTCTCCATGCAACCTCATGCGGATTGAAGAGCAATTGGTCTTTCATGAGAAAAATTGCTGGGAATAAGCAATCAAGAATTGCATTGGAAAGAGCTCAGAAAATGATATACATTGCTGGTCATGCCAAGCTTGAAAGGCGAGACATTTTGAATGAGGAAGAGAAGGATGCAGAACTATTTGCCATGACAGGTAGTGAAAATGGCATGTTGGCTGAGGTCTTTGCTGATGCACCCTTAGTGTAA 2436 0.4392 MPQNETHCQLGALTTSSTSYESPVLTLNLREPEKPNININSSSVCAMTSTNSISTDPLPSAVVAVDDIAVKAVNKRYEGLVTVRTKALKGKGAWYWVHLEPILIRNSDSGLPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSISPMPISTVALPYSNNHNSKKRSSPHMAVTSPYQNHSLALVESSRFCSELGFSPTQLNTGTNQQHLILSGGKEDLCALAMFEDSVKRLKSPKTSPCPALSREQINSALELLADWFYESCWSVSLSTLEHPKFQAFLNQVGLPTNLSREISGPRLDAKFNEAETQSEAKIRDAMFFQVASEGWKNNNWYSLCCGGDNLVKFTVNLPNGASVFQKAIFTGGVVSPKYAEEILWETVTSISGSSVQRCAGIVADKYKAKALRNLEIQNHWMVNIPCQLQGFISLIKDFNDDLPLFRVVTENCLKLANFVNNESHVRNSFLKFRMQELEYSGLLRVPSPKCDPLKNFASVFPMLEDILSCARVIQMVMLENSFKVTCMEDPLAREVAEMTQSDRFWNELEAVYSLVKLIKGMVRDMEVERPLIGRCLPLWEELRTKVKEWCAKFSVVEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASKEEAHIVLMELMKWRSEGLDPLYAQAVQMKQKDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGLKSNWSFMRKIAGNKQSRIALERAQKMIYIAGHAKLERRDILNEEEKDAELFAMTGSENGMLAEVFADAPLV 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1110 811 Coils Coil 646 666 - -
Lele47g1110 811 SUPERFAMILY Ribonuclease H-like 369 770 IPR012337 -
Lele47g1110 811 PANTHER OSJNBA0013A04.12 PROTEIN 73 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1110 Lele-ChrLele47 16733490 16735925 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1110 47 16733490 16735925 Lele48g1173 48 16268320 16270755 ECH
Lele47g1110 47 16733490 16735925 Lele47g1110 47 16733490 16735925 ECH
Lele45g0276 45 2250543 2252978 Lele47g1110 47 16733490 16735925 hybridization
Lele46g0300 46 1990160 1992607 Lele47g1110 47 16733490 16735925 hybridization