Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0300 ATGCTCCAAAACGAAACCCACTGTCAACTTGGTGCACTTACCACAAGCTCAACTTCATATGAGAGCCCCGTCCTCACCTTGAATCTCAGAGAACCAGAGAAGCCCAATATCAACATCAATTCCAGCTCCTTTTGTGCAATGACTTCCACCAACTCAACATCCACTGACCCGCTTCCTTCCGCCGTGGTCGAGGTCGAGGTCGCGGTCGAGGACATCGCCGTCAAGGCTGTGAACAAGCGCTACGAAGGATTGGTCACTGTGCGGAACAAAGCCTTAAAGGGCAAAGGAGCTTGGTACTGGGCGCATTTGGAGCCTATTCTGATTCGGAACTCCGATTCTGGCCTTCCCAAATCCGTGAAGCTCAAATGTTCCTTATGTGACTCTGTTTTCTCTGCTTCAAACCCATCGAGAACTGCTTCGGAGCACTTGAAGAGAGGAACATGCCCCAATTTCAGCTCTGGTTTGAGGCCCAATTCTTCAATTTCGGCTATGCCCATATCTACTGTGGCTTTGCCTAATTCAAACAACCACCACAACAAAAAGAGAAGCTCTTCTCACATGGCTGTTACTTCTCCTTATCAAAATCATTCCTTAGCGTTGGTTGAGTCCTCTCGATTTTGTAGCGAACTGGGATACTCACCAACCCAACTTAACACGGGGATAAATCAACAACATTTGATTTTGTCGGGTGGGAAGGAAGATTTATGTGCATTAGCCATGTTTGAAGATAGTGTGAAGAGGCTCAAGAGTCCCAAGACCTCTCCTTGTCCCGCTTTGAGCAGGGAACAGATTAACTCTTCTCTAGAATTGCTCGCCGATTGGTTCTACGAGTCATGTGGTTCTGTGTCTTTATCAACCCTTGAGCACCCCAAGTTTCAAGCCTTTCTCCACCAAGTGGGTTTGCCAACAAATTTGCGTCGTGAGATATCTGGTCCTCGACTTGATGCCAAGTTCAATGAGGCTGAGATTGAGTCAGAAGCCAAAATAAGAGATGCAATGTTTTTCCAAGTAGCTAGTGAAGGTTGGAAGAACAATAATTGGTATAGCTTGTGTTGTGGAGGTGACAATTTGGTTAAGTTTACTGTGAATCTTCCGAATGGAGCTAGTGTGTTCCAAAAGGCTGTCTTTACCGGGGGAGTTGTGTCTCCCAAATATGCAGAGGAGATTTTGTGGGAAACAGTCACGCGTATAAGTGGGAGTTCTTTGCAGAGATGTGCGGGAATTGTAGCAGACAAATATAAGGCCAAAGCATTAAGGAACTTGGAGATTCAAAATCATTGGATGGTAAATATCCCTTGTCAGCTTCAGGGCTTCATTAGTTTAATCAAGGATTTTAACAACGACCTCCCACTTTTCAGGTTTGTCACTGAAAATTGCTTAAAGCTTGCAAATTTTGTAAACAATGAATCCCATGTCAGGAATAGTTTTCTCAAGTTCCGGATGCAGGAGCTTGAGTATTCTGGGTTGCTTCTTGTTCCTTCGCCTAAATGTGATCATCTTAAGAACTTCGCATCTGTCTTTCCAATGTTGGAGGACATCTTGAGCTGTGCTAGAGTGATCCAAATGGTTATGTTGGAGAACTCGTTTAAGGTAACATGCATGGAGGATCCACTGGCGAGGGAAGTTGCTGAAATGACTCAAAGTGATAGGTTTTGGAATGAATTGGAGGCAGTTCATTCACTTGTAAAACTTATCAAAGGAATGGTCCGTGACATGGAGGCTGAGAGGCCACTGATTGGTCGATGCCTTCCTCTTTGGGAGGAGCTGAGAACCAAAGTGAAGGAGTGGTGTGCAAAATTTAGCATAGTGGAAGGACCTGTGGAGAAAATACTTGAAAAAGGTTTCAGAAAAAATTATCACCCTGCATGGTCAGCTGCATTTATTCTCGACCCACTCTACTTGATTAAAGATACAAGTGGAAAGTTCCTCCCCCCATTCAAATGCTTGACACGTGAACAAGAGAAAGATATAGATAAGCTATTGACAAGGCTAGCTTCTAAAGAAGAAGCTCATATTGTGTTAATGGAGCTCATGAAGTGGAGGTCAGATGGGCTGGACCCACTTTATGCTCAGGCTGTTCAGATGAAACAAAAGGATCCAGTGACTGGGAAGATGAAAGTTGCAAACCCACTGAGTAGTAGACTTGTTTGGGAAACTTGCTTAAGTGAGTTTAAATCCCTCGGGAAGATTGCAGTAAGGCTTATTTTTCTCCATGCAACCTCATGCGGATTGAAGAGCAATTGGTCTTTCATGAGAAAAATTGCTGGGAATAAGCACTCAAGAATTGCATTGGAAAGAGCTCAGAAAATGATATACATTGCTGGTCATGCCAAGCTTGAAAGGCGAGACATTTCGAATGAGGAAGAAAAGGATGCAGAACTTTTTGCTGTGACAGGTAGTGAGGATGGCATGCTGGCTGAGGTCTTTGCTGATGCACCCTTAGTGTAA 2448 0.4424 MLQNETHCQLGALTTSSTSYESPVLTLNLREPEKPNININSSSFCAMTSTNSTSTDPLPSAVVEVEVAVEDIAVKAVNKRYEGLVTVRNKALKGKGAWYWAHLEPILIRNSDSGLPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCPNFSSGLRPNSSISAMPISTVALPNSNNHHNKKRSSSHMAVTSPYQNHSLALVESSRFCSELGYSPTQLNTGINQQHLILSGGKEDLCALAMFEDSVKRLKSPKTSPCPALSREQINSSLELLADWFYESCGSVSLSTLEHPKFQAFLHQVGLPTNLRREISGPRLDAKFNEAEIESEAKIRDAMFFQVASEGWKNNNWYSLCCGGDNLVKFTVNLPNGASVFQKAVFTGGVVSPKYAEEILWETVTRISGSSLQRCAGIVADKYKAKALRNLEIQNHWMVNIPCQLQGFISLIKDFNNDLPLFRFVTENCLKLANFVNNESHVRNSFLKFRMQELEYSGLLLVPSPKCDHLKNFASVFPMLEDILSCARVIQMVMLENSFKVTCMEDPLAREVAEMTQSDRFWNELEAVHSLVKLIKGMVRDMEAERPLIGRCLPLWEELRTKVKEWCAKFSIVEGPVEKILEKGFRKNYHPAWSAAFILDPLYLIKDTSGKFLPPFKCLTREQEKDIDKLLTRLASKEEAHIVLMELMKWRSDGLDPLYAQAVQMKQKDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGLKSNWSFMRKIAGNKHSRIALERAQKMIYIAGHAKLERRDISNEEEKDAELFAVTGSEDGMLAEVFADAPLV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0300 815 Coils Coil 650 670 - -
Lele46g0300 815 SUPERFAMILY Ribonuclease H-like 377 774 IPR012337 -
Lele46g0300 815 PANTHER OSJNBA0013A04.12 PROTEIN 77 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0300 Lele-ChrLele46 1990160 1992607 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0276 45 2250543 2252978 Lele46g0300 46 1990160 1992607 ECH
Lele46g0300 46 1990160 1992607 Lele46g0300 46 1990160 1992607 ECH
Lele46g0300 46 1990160 1992607 Lele47g1110 47 16733490 16735925 hybridization
Lele46g0300 46 1990160 1992607 Lele48g1173 48 16268320 16270755 hybridization