Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1035 ATGCAAGGAGTGAGACCAGGCTGGGCTGGTAAGGCTCTCGTTGTTATAATAATCACTTCGATCTTTTTCCGATGCGTCTGTGCATCCAACCACTCCGTCGGCGGACCTTCCGGTTGGGACCTCCGTTCGAATCTCCAATTGTGGTCTGCGGCGACCACTTTTCTTGTTGGTGACAATCTAGTGTTCACATACACGCCGAACCACGACGTGGTGGAAGTTAGACAGCTTGGTTATGACACCTGTGTAATCTCCAACGCCATCGGCACCTACGATGATGGAGAGACTGTAATTCAACTCACTGAACCAGGAATTAGGCACTTCGTCTGTGGCCGATCAGGGCACTGTCAACAAGGACTCAAACTACAGGTCCAAGTTATTGCACCGCCCAACGATGGAACTAATATTGGTGGTCGTAGTCCACGACCCAGGCTCCCGCCAAGGAGACCTCCTCCTTCGCCTCGAAGATCTCATCCTCCAACTTCTCCTCCTCCACCTTCTCCTCTGCCATATCCTCCTCCTGCTGCTGTACCTGCTGTACATGTACCTGCACCTGCTTCTGGTGTTGAAAACGTCAAGGTGGATACGCCAGGGCTGTTCCAAGGACTGGTGGCGCTGGTAGTGCTTTACTCTCTTACACTCGCGCTGATTTGA 651 0.5238 MQGVRPGWAGKALVVIIITSIFFRCVCASNHSVGGPSGWDLRSNLQLWSAATTFLVGDNLVFTYTPNHDVVEVRQLGYDTCVISNAIGTYDDGETVIQLTEPGIRHFVCGRSGHCQQGLKLQVQVIAPPNDGTNIGGRSPRPRLPPRRPPPSPRRSHPPTSPPPPSPLPYPPPAAVPAVHVPAPASGVENVKVDTPGLFQGLVALVVLYSLTLALI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1035 216 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Lele47g1035 216 FunFam Blue copper 27 131 - -
Lele47g1035 216 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Lele47g1035 216 MobiDBLite consensus disorder prediction 142 171 - -
Lele47g1035 216 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Lele47g1035 216 CDD Phytocyanin 30 125 - -
Lele47g1035 216 PANTHER BLUE COPPER PROTEIN 28 158 IPR039391 GO:0009055
Lele47g1035 216 MobiDBLite consensus disorder prediction 127 171 - -
Lele47g1035 216 Gene3D - 27 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1035 Lele-ChrLele47 16188360 16189435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1035 2 169 Miscellaneous Gene Families AT2G32300 36.257 3.69e-33 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1035 47 16188360 16189435 Lele47g1035 47 16188360 16189435 ECH
Lele45g0360 45 2840380 2841439 Lele47g1035 47 16188360 16189435 hybridization
Lele46g0387 46 2584211 2585283 Lele47g1035 47 16188360 16189435 hybridization