Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1001 ATGGCAGATCAGAACCAAAAACCAGAGCTCTTTGAGCTCAACAATGGGACATTGCATGTCCTCATCACCAATGTCGGCTGCACGATCACTTCCTTATCGGTGCCTGGCAAAGATGGAACCTTGTCTGACGTTGTTCTCGGGTTCGACTCTGTGGATCCATATCTGAAAGGGCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCGAACAGAATCAAAGAGGGGAAGTTTACACTTGATGGGGTTCAATACGCTTTGCCTGTCAACAAGGCACCAAACAGTCTCCATGGTGGCAACGTGGGGTTTGATAAGAAGGTGTGGCAGGTTATTGAGTATAAGAAAGGTGAAACCCCTTCCATCACTTTCAAGTATGAAAGCCATGATGGAGAGGAAGGTTATCCTGGGGAGCTTACTGTTACTGCAACTTATTCCCTTACTTCTAAGACAACTCTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAGCCCACTATAGCTAACTTAGCTCAGCATACATACTGGAACTTTGCAGGCCACAGCTCGGGGAGCATTCTTGACCATTCAATTCAGATATGGGCTAATCACATCACTCCTGTGGATGAAAATATTGTACCAACTGGTGAAATTAAGCCTGTGAAGGATACCCCATTTGATTTTACATATGAGAAGAGGATCGGCGACACCATCGGTCAGGTTGGAATAGGATACGACCACAATTACGTGCTTGGAGGCGGCGATGAGAAGGAAGGTTTAAAACATGCTGCAAAAGTGAAGGATCCCTCAAGTTCCAGGGTTTTGAACCTGTGGACAAATGCCCCTGGCATGCAATTCTACACTGGAAATTATGTCAGTGGTGTTTCTGGAAAACAAGGTGCTGTTTATGAAAAACATGCAGGACTGTGCTTGGAGACACAGGGGTTCCCTAATGCCATAAACCAGCCGAATTTCCCGTCCGTTGTCGTCCGACCCGGTCAGAAATACCAGCATTCCATGTTGTTTGAGTTTTCAGTTGAGTGA 1020 0.4647 MADQNQKPELFELNNGTLHVLITNVGCTITSLSVPGKDGTLSDVVLGFDSVDPYLKGLAPYFGCIVGRVANRIKEGKFTLDGVQYALPVNKAPNSLHGGNVGFDKKVWQVIEYKKGETPSITFKYESHDGEEGYPGELTVTATYSLTSKTTLRLDMEGVPKDKPTIANLAQHTYWNFAGHSSGSILDHSIQIWANHITPVDENIVPTGEIKPVKDTPFDFTYEKRIGDTIGQVGIGYDHNYVLGGGDEKEGLKHAAKVKDPSSSRVLNLWTNAPGMQFYTGNYVSGVSGKQGAVYEKHAGLCLETQGFPNAINQPNFPSVVVRPGQKYQHSMLFEFSVE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1001 339 Gene3D - 1 339 IPR014718 GO:0030246
Lele47g1001 339 SUPERFAMILY Galactose mutarotase-like 4 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele47g1001 339 CDD galactose_mutarotase_like 10 336 - -
Lele47g1001 339 FunFam Aldose 1-epimerase 2 338 - -
Lele47g1001 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Lele47g1001 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Lele47g1001 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1001 Lele-ChrLele47 15945111 15947215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1001 6 337 Miscellaneous Gene Families AT3G47800 50.000 6.75e-108 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1001 47 15945111 15947215 Lele47g1001 47 15945111 15947215 ECH
Lele45g0403 45 3142247 3149613 Lele47g1001 47 15945111 15947215 hybridization
Lele46g0422 46 2850392 2852529 Lele47g1001 47 15945111 15947215 hybridization