Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1455 ATGGGTTTCTTCAGCACTATATTTGGAGTTCTTGGATTCGGAATTGGGATCCCAGTTGGTCTTGTTATTGGATATTTTCTCTTCATTTACGTTCAACCCAGCGATGTAGAGGATCCTGAGATTATTCCATTGACCAAGCAAGATGAAGACACTTTGCAACGAATTCTTCCTGAGATTCCAATTTGGCTGAAAAATCCAGACTTTGATCGGGTTGATTGGTTAAACAAGTTTCTTGAATACATGTGGCCCTACCTTGACAAGGCTATTTGCAAGACTGCAAAGGGTATTGCAACACCCATAATCGATGAGCAGATAAAAAATTACAAAATAGAGTCAGTTGAGTTTGTAAAGTTAACACTTGGGACCTTACCTCCAACTTTGCAAGGGATGAAAGTCTTTGAGACTGATGAGAAGGAGATGATCATGGAGACTGGTTTAAAATGGGCCGCAAATCCCAATGTCATCGTTGCTGTTAAGGCATTTGGGTTGAAAGCAACCGTTCAGGTGGTAGACTTGCAAGTTTTTGTTTCACCACGGATTACATTGAAACCTTTGGTTCCAACATTTCCTTGCTTTTGCAACATTTTTGTGTCTCTCATGGAGAAGCCACATGTTGACTTTGGGATAAAACTTGTAGGGGCTGATCTTATGTCCATTCCTGGCCTCTACAGGTTTGCTCAGGAGATTATCAGAGATCAAGTTGCGAATATGTACCTGTGGCCAAAAACCCTGGAAGTGCAAGTTTTAGATCCAATAAAAGCATTGAAGCGGCCCGTGGGAATTCTCAATGTAAAGGTTCTGAGGGCTATAAAGCTTAGAAAGAAAGATTTACTTGGTGCGTCAGACCCTTACGTAAAAGTAAAGCTCTCTGATGAAAGGATGCAATCAAAAAAGACTTCAGTGAAGCACAAATGCTTGAATCCGGAATGGAATGAAGAATTTAAACTTCTTGTTAAAGATCCTGAGAACCAGGTTTTAAGTCTTCAAGTTTATGACTGGGATAAGGTTGGCAAGCATGAAAAGATGGGTGTAAATATAGTCCCTGTAAAAGAAGTTGCCCCTGAAGAGGCTAAGGTTTTTACTCTTGATCTCTTGAAAAGCACGGATCCCAACGATGGCGAGAAAGATAAGTCCCGGGGTCAGATTGTCGTAGAATTGACATATAAACCATTCAAAGAGGAGGACTTGCTCAAGGAAAACGGGGCTCACATAATACAAAACGTTCCTGAAGGTACTCCTCCTGGGGGAGGCCTGCTTGTGGTTATAGCCCACGAAGCTCAAGATGTTGAAGGAAAGTATCACACTAATCCTCAAGCTCGAATTCTTTTCAAAGGGGAGCAGAAAAGGACCAAGCATATAAAGAAGAACAGAGATCCAAGATGGGCTGAGGAGTTCCAATTTGTAGCAGTGGAACCTCCCACTAATGAGAAAATACACGTGGAAGTTGTTAGCACCTCGTCGCGTAACCTGTTGCATCCGAAGGAATATCTGGGTTATGTTGAGATCAGTCTGGCGGATGTGGTGAGCAACAAGAGAATTAATGAAAAGTATCATCTGATAGACTCCAAGAATGGTCGCATCCAAATAGAGTTGCAGTGGGTTCCTTCGTAA 1611 0.4196 MGFFSTIFGVLGFGIGIPVGLVIGYFLFIYVQPSDVEDPEIIPLTKQDEDTLQRILPEIPIWLKNPDFDRVDWLNKFLEYMWPYLDKAICKTAKGIATPIIDEQIKNYKIESVEFVKLTLGTLPPTLQGMKVFETDEKEMIMETGLKWAANPNVIVAVKAFGLKATVQVVDLQVFVSPRITLKPLVPTFPCFCNIFVSLMEKPHVDFGIKLVGADLMSIPGLYRFAQEIIRDQVANMYLWPKTLEVQVLDPIKALKRPVGILNVKVLRAIKLRKKDLLGASDPYVKVKLSDERMQSKKTSVKHKCLNPEWNEEFKLLVKDPENQVLSLQVYDWDKVGKHEKMGVNIVPVKEVAPEEAKVFTLDLLKSTDPNDGEKDKSRGQIVVELTYKPFKEEDLLKENGAHIIQNVPEGTPPGGGLLVVIAHEAQDVEGKYHTNPQARILFKGEQKRTKHIKKNRDPRWAEEFQFVAVEPPTNEKIHVEVVSTSSRNLLHPKEYLGYVEISLADVVSNKRINEKYHLIDSKNGRIQIELQWVPS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1455 536 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 67 247 IPR039010 -
Lele46g1455 536 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 249 IPR031468 GO:0008289
Lele46g1455 536 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 414 535 IPR035892 -
Lele46g1455 536 Gene3D C2 domain 418 535 IPR035892 -
Lele46g1455 536 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 533 IPR045050 GO:0008289
Lele46g1455 536 FunFam Synaptotagmin-2 isoform A 255 409 - -
Lele46g1455 536 FunFam Extended synaptotagmin-2 418 535 - -
Lele46g1455 536 CDD C2 262 355 - -
Lele46g1455 536 Gene3D C2 domain 256 407 IPR035892 -
Lele46g1455 536 ProSiteProfiles C2 domain profile. 240 362 IPR000008 -
Lele46g1455 536 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 257 393 IPR035892 -
Lele46g1455 536 ProSiteProfiles C2 domain profile. 400 517 IPR000008 -
Lele46g1455 536 Pfam C2 domain 260 357 IPR000008 -
Lele46g1455 536 Pfam C2 domain 419 519 IPR000008 -
Lele46g1455 536 PRINTS C2 domain signature 277 289 IPR000008 -
Lele46g1455 536 PRINTS C2 domain signature 304 317 IPR000008 -
Lele46g1455 536 PRINTS C2 domain signature 326 334 IPR000008 -
Lele46g1455 536 SMART C2_3c 261 361 IPR000008 -
Lele46g1455 536 SMART C2_3c 418 516 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1455 Lele-ChrLele46 21290523 21294951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1455 255 515 Lipid Metabolism Gene Families AT3G61300 27.305 5.55e-11 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1455 46 21290523 21294951 Lele47g0053 47 387766 394223 hybridization
Lele46g1455 46 21290523 21294951 Lele48g0057 48 1098208 1104065 hybridization