Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1422 ATGACAAATAGCTCATCTTCGGAAAAGCACGGTCAAGATCAACCTGAAATTAGTGGTCCCACTCCCAAATCACAGCGAACCAAAATGGGCAAATCCGAAGACAATGAGAAAAAGAACTTGGGTAAGAAACTCCAAGATGTGGGAATAAGCATCCCAATAGTGTATGGTAACATGGCTTTCTGGCTTGGCAAGAAGGCAAGCGATTTCAACAATCCAACAAAGGTTGTGGAGTCACCTCCTTTTGAGTTCTCAGAGTCAGGATGGGGTGAAATTGAAGTTGCCATCACACTTCATTTCTACAGCGATGTTTGTGACAAGCCTTTGAACTTGTATCATCACTTGAAGTTATATCCAGAGTATGAGAACAGTTCCATGTCAACAAAAAAGCCTGTTGTTGTGGAATCATATGATGAGATAGTTTTCCCTGATCCTTCTGAGGCTTTTTTAGCTTGTGTGCAAAACCATCCAGTTGAACTTTCCCAGATTGCCTGCCGGAATAACCTTACCTCATCCAAGTATCTTTCTTAG 528 0.4186 MTNSSSSEKHGQDQPEISGPTPKSQRTKMGKSEDNEKKNLGKKLQDVGISIPIVYGNMAFWLGKKASDFNNPTKVVESPPFEFSESGWGEIEVAITLHFYSDVCDKPLNLYHHLKLYPEYENSSMSTKKPVVVESYDEIVFPDPSEAFLACVQNHPVELSQIACRNNLTSSKYLS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1422 175 ProSiteProfiles YEATS domain profile. 1 155 IPR005033 GO:0006355
Lele46g1422 175 PANTHER PROTEIN AF-9 HOMOLOG 39 67 - -
Lele46g1422 175 Gene3D YEATS domain 66 166 IPR038704 -
Lele46g1422 175 MobiDBLite consensus disorder prediction 1 41 - -
Lele46g1422 175 Pfam YEATS family 68 118 IPR005033 GO:0006355
Lele46g1422 175 MobiDBLite consensus disorder prediction 1 26 - -
Lele46g1422 175 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1422 Lele-ChrLele46 21042636 21044159 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1422 46 21042636 21044159 Lele47g0086 47 588525 593091 hybridization
Lele46g1422 46 21042636 21044159 Lele48g0090 48 1321902 1323647 hybridization