Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0090 ATGGACTGTGTATGTTCGAGGAACAACATTGAGTACCTTGGAGTGATCATAAAGCGTGCTGTTTTTCAGCTGCATTCTAGTTTCAACAATCCAACAAGGGTTGTGGAGTCACCTCCTTTTGAGTTGTCAGAGTCAGGATGGGGTGAGTTTGAAGTTTCCTTCACACTTCATTTCCACAGAGACGTTTGTGACAAGCCTTTGAACTTGTATCATCACTGGAAGTTATATCCAGAGTATGAGAACAGTTCCATGTCAACAAAAAAGGCTGTTGTTGTGGAATCATATGATGAGATAGTTTTCCCTGATCCTTCTGAGGCTTTTTTAGCTCGTGCGCAAAACCATCCAGTTGTTAACTTTCCAAGTTTGCCTGCCGGAATAACCTTACCTCATCCAATTCCTGTTGAACCCAATGGTTCACAAATTTCTCTGAAGCAGATGAGCTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTGGATTGAAGCAACAGACTTGTAA 495 0.4283 MDCVCSRNNIEYLGVIIKRAVFQLHSSFNNPTRVVESPPFELSESGWGEFEVSFTLHFHRDVCDKPLNLYHHWKLYPEYENSSMSTKKAVVVESYDEIVFPDPSEAFLARAQNHPVVNFPSLPAGITLPHPIPVEPNGSQISLKQMSSYSLQQLVSRWIEATDL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0090 164 Gene3D YEATS domain 3 124 IPR038704 -
Lele48g0090 164 Pfam YEATS family 13 77 IPR005033 GO:0006355
Lele48g0090 164 ProSiteProfiles YEATS domain profile. 1 114 IPR005033 GO:0006355
Lele48g0090 164 PANTHER PROTEIN AF-9 HOMOLOG 9 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0090 Lele-ChrLele48 1321902 1323647 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1324 45 23000473 23005767 Lele48g0090 48 1321902 1323647 hybridization
Lele46g1422 46 21042636 21044159 Lele48g0090 48 1321902 1323647 hybridization