Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0086 ATGGCATGTTGTTATTGTTCAAGAGTCTACATCTTTGATTATCCCCTGCATCGTGATCAGAACAGCTTTTCTAAAACCATCCCTTGTGTCAAACGACATCATTCAGCTTCAGATTTCTCAGACGAACTTATGATTTATACGACCAACAGCTCATCTTCGAAAAAGCACGGTCAAGATCAACCTGAAATTAGTGGTCCCACTCCCAAATCACAGCGAACCAAAATGGGCAAATCCGAAGACAATGAGAAAAAGAACTTGGGTAAGAAACTCAAAGATGTGGAAATAAGCGTCCCAATAGTGTTTGGTAACATCGCATTCTGGCTTGGCAAGAAGGCAAGCGAGTATCAGTCACATAAATGGACTGTGTATGTTCGTGGAGCAACCAATGAGGACCTTGGAGTGATCATAAAGCGTGCTGTTTTTCAGCTGCATTCCAGTTTCAACAATCCAACAAGGGTTGTGGAGTCACCTCCTTTTGAGTTGTCAGAGTCAGGATGGGGTGAATTTGAAGTTGCCATCACACTTCATTTCCACAGCGATGTTTGTGACAAGCCTTTGAACTTATATCATCACTTGAAGTTATATCCAGAGGATGAGAACAGTTCCATGTCAACAAAAAAGCCTGTTGTTGTGGAATCATATGATGAGATAGTTTTCCCTGATCCTTCTGAGGCTTTTTTAGCTCGTGTGCAAAACCATCCAGTAGTGAACTTTCCAAGATTGCCTGCAGGAATAACCTTACCTCATCCAATACCTGTTGAAGATGCAAGTAAAAGGAGGAGAGGTGATACTAAAGATCATCCACTAACCCAATGGTTCACAAATTTCTCTGAGGCAGATGAGCTCTTACAGCTTGCAGCAGCTCGCCAGCAGGTTCAAGCTCATATTGCTAGACACAAACGACAGATAAGTTTGATAGATGGGCAGCAGCAGCAGCAGTTCAAATCATCCTCTGACCAGTAG 963 0.4268 MACCYCSRVYIFDYPLHRDQNSFSKTIPCVKRHHSASDFSDELMIYTTNSSSSKKHGQDQPEISGPTPKSQRTKMGKSEDNEKKNLGKKLKDVEISVPIVFGNIAFWLGKKASEYQSHKWTVYVRGATNEDLGVIIKRAVFQLHSSFNNPTRVVESPPFELSESGWGEFEVAITLHFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVESYDEIVFPDPSEAFLARVQNHPVVNFPRLPAGITLPHPIPVEDASKRRRGDTKDHPLTQWFTNFSEADELLQLAAARQQVQAHIARHKRQISLIDGQQQQQFKSSSDQ 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0086 320 PANTHER PROTEIN AF-9 HOMOLOG 85 316 - -
Lele47g0086 320 Gene3D YEATS domain 90 242 IPR038704 -
Lele47g0086 320 MobiDBLite consensus disorder prediction 50 85 - -
Lele47g0086 320 ProSiteProfiles YEATS domain profile. 89 233 IPR005033 GO:0006355
Lele47g0086 320 CDD YEATS_TFIID14_like 95 226 - -
Lele47g0086 320 Pfam YEATS family 117 196 IPR005033 GO:0006355
Lele47g0086 320 FunFam Transcription initiation factor TFIID subunit 14 90 243 - -
Lele47g0086 320 MobiDBLite consensus disorder prediction 50 72 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele47g0086 Lele-ChrLele47 588525 593091 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1324 45 23000473 23005767 Lele47g0086 47 588525 593091 hybridization
Lele46g1422 46 21042636 21044159 Lele47g0086 47 588525 593091 hybridization