Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1385 ATGTCTGGTCCGCTGGATCGATTCGCCAGACCTTGCTTTGAGGGATTCTCTGGAAGTGATGAAAGACGGGATAAGAGATCTGATTTTGAGAACTCTGAGGATGAAAGACGGACAAGAATTGGTTCTCTAAAAAAGAAAGCAATTAATGCATCTACCAAATTCAAGCATACTCTCAAGAAAAAGAGTGGCAGGAGAAAAAGTGATGGCCGGGTTAGTTCAGTTTCTATCGAGGATGTTCGGGATGTTGAGGAACTACAGGCTGTTGATGCCTTCAGACAATCATTGATTATGGATGAATTGCTCCCAGAAAAACACGATGATTACCATATGATGTTAAGGTTCCTAAAGGCAAGGAAATTTGATGTTGAAAAAGCAAAGCACATGTTTGCTGATATGCTCAAATGGAGGAAAGATTTTGGTGCTGACACTATTATGGAGGATTTTGAGTATAAGGAGTTAAGTGATGTTCTGGAGTATTACCCTCATGGTCATCATGGTGTTGATAAGGAGGGAAGACCAGTTTATATTGAAAGACTTGGAAAGGTTGATCCAAACAAACTTATGCAAGTTACAAATTTGGAGAGATATGTAAAGTACCATGTACAAGAGTTTGAGAAAATTTTTGCGATTAAGTTTCCTGCCTGCGCCATTGCTGCCAAGAGGCACATAGATTCTAGCACCACAATCTTAGACGTTCAAGGCGTGGGTCTGAAGAACTTTACAAAGTCTGCCCGGGAACTCGTTATGCGATTGCAAAAGATTGATGGAGACAATTACCCTGAGACTCTCTGCCAGATGTTTATTATAAATGCTGGCCCTGGATTCAGGCTACTGTGGAACACTGTCAAAACTTTTATTGATCCCAAAACAACTTCTAAGATTCATGTTCTTGGAAACAAGTACCAGAGCAAATTGCTTGATATAATTGATGCCAGTGAGTTGCCAGAATTTCTTGGAGGCACCTGCACTTGTGCAGATCTGGGAGGTTGCCTTAGATCTGACAAAGGGCCTTGGAAGAATCCTGAAATATTGAAGATGGTTCTCAGGGGTGGAGCACGGAGGGCTAGGCAGGTAGTAAAAGTTCTGAACAGTGAAGGAAAGGTTATTGCATATGCAAAACCTCGATATCCAATGGTAAAAGGTAGTGATACATCTACTGCTGAATCAGGTTCTGACGCAGAAGATGTGGCTTCTCCTAAAGCAATGAAGAGTTACTCACATCTTAGGTTGACCCCTGTTCACGAGGAAGCTAAGGTAGTTGGTGAGACAAGCTATGGTGGTAGCTTATCAGCATTTGATGAGTATGTTCCAATGGTGGACAAATCTGTTGATGCTAGCTTGAAGAAGCAACCATCTCTGCAGAGGTCTTATACTTCTAAAGGATTGCCTCCCCTTGCCGACATTCAGACTACTCCAGATGGGATTCAAACACGAATTTGGGTGGCCTTGACTGTCTTCTTCATGACCCTTTTCACCCTGTTCCAATCATTTGCACGTCACATGACCAGCATATTTCCTACAATGTCAGCCAATGATGGTCAGATTACTTCTGCACCAACTTTTGATGCTACAAACAGGGAATGTCATCTTCCTTCACCATGTTCAGCAGCACATACTGAAGCAGACCAACTTTCCTTCATGCTAAAGAAGTTGGGTGAGCTTGAAGAGAAGGTTGACACACTCCAATCCAAGCCATCTGAGATGCCTAATGAGAAAGAAGAATTGTTGAATGCTGCTGTCTGTCGTGTGGATGCTTTGGAAGCAGAGTTGATTGCTACTAAAAAGGCTCTCTATGAAGCCTTAATAAGACAAGAGGAACTGCTTGCCTACATTGATCGTCAAGAAGCAGCGAAGTTACGGAAAAAGAAGTTTTGCTGGTGA 1881 0.4237 MSGPLDRFARPCFEGFSGSDERRDKRSDFENSEDERRTRIGSLKKKAINASTKFKHTLKKKSGRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPEKHDDYHMMLRFLKARKFDVEKAKHMFADMLKWRKDFGADTIMEDFEYKELSDVLEYYPHGHHGVDKEGRPVYIERLGKVDPNKLMQVTNLERYVKYHVQEFEKIFAIKFPACAIAAKRHIDSSTTILDVQGVGLKNFTKSARELVMRLQKIDGDNYPETLCQMFIINAGPGFRLLWNTVKTFIDPKTTSKIHVLGNKYQSKLLDIIDASELPEFLGGTCTCADLGGCLRSDKGPWKNPEILKMVLRGGARRARQVVKVLNSEGKVIAYAKPRYPMVKGSDTSTAESGSDAEDVASPKAMKSYSHLRLTPVHEEAKVVGETSYGGSLSAFDEYVPMVDKSVDASLKKQPSLQRSYTSKGLPPLADIQTTPDGIQTRIWVALTVFFMTLFTLFQSFARHMTSIFPTMSANDGQITSAPTFDATNRECHLPSPCSAAHTEADQLSFMLKKLGELEEKVDTLQSKPSEMPNEKEELLNAAVCRVDALEAELIATKKALYEALIRQEELLAYIDRQEAAKLRKKKFCW 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1385 626 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
Lele46g1385 626 SMART sec14_4 152 323 IPR001251 -
Lele46g1385 626 MobiDBLite consensus disorder prediction 16 42 - -
Lele46g1385 626 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Lele46g1385 626 Pfam CRAL/TRIO, N-terminal domain 104 130 IPR011074 -
Lele46g1385 626 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 26 614 - -
Lele46g1385 626 Gene3D - 140 350 IPR036865 -
Lele46g1385 626 Coils Coil 544 564 - -
Lele46g1385 626 Gene3D - 29 139 - -
Lele46g1385 626 MobiDBLite consensus disorder prediction 1 42 - -
Lele46g1385 626 CDD SEC14 153 321 IPR001251 -
Lele46g1385 626 FunFam SEC14 cytosolic factor 140 352 - -
Lele46g1385 626 SUPERFAMILY CRAL/TRIO domain 152 346 IPR036865 -
Lele46g1385 626 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Lele46g1385 626 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Lele46g1385 626 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Lele46g1385 626 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Lele46g1385 626 Pfam CRAL/TRIO domain 158 320 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1385 Lele-ChrLele46 20731503 20735800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1385 86 317 Acyl Lipid Metabolism Gene Families AT5G47730 30.041 7.22e-22 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1385 46 20731503 20735800 Lele47g0121 47 895234 902502 hybridization
Lele46g1385 46 20731503 20735800 Lele48g0126 48 1616950 1620927 hybridization