Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g1361 ATGACTATGTCTACGCAGGTTATTAATCGAATGGAGGGAGCTGGCGGTGGCAGTGCTTCGGCTGCTGCACCTGTAAACCAGGGGGTGCAGGACTTTATGAGGCTCTTTCAATATTATCTGGATAAAACTACTCCTCATACTACGTATAGATGGATTGGGAGTTTGGTTTTGGCATCAATCTATGCTTTGAGGGTTTATTATGTCCACGGATTCTACATTGTGTCTTATGGTCTGGGAATCTATTTGCTGAATCTGTTGATTGGGTTTGTGTCTCCTTTGGTTGATCCGGAGCTGGAACCTTCAGATGGACCTATGCTGCCAACTAAAGGTTCTGATGAGTTCAAACCTTTCATTCGTCGACTTCCTGAATTTAAGTTCTGGTATTCTTTCACAAAAGCTTTCTGCATAGCTTTTGTCATGACCTTCTTTTCTGTATTTGATGTCCCTGTGTTTTGGCCTATACTACTCTGTTACTGGATTGTTCTGTTTGTCCTTACCACGAGGCGCCAAATTGCACACATGATCAAATACAAATATGTCCCATTCAACATCGGAAAGCAGGTCGAAAGTATAGCAGTAAGAAGCCTTCTGCAAGAAGCAGTGGATCTAGAGCAGAATGAAGCTAGGCTGTTGTTGCATGCTCTGAAGGATACTCATTTACTGGATTGA 669 0.4275 MTMSTQVINRMEGAGGGSASAAAPVNQGVQDFMRLFQYYLDKTTPHTTYRWIGSLVLASIYALRVYYVHGFYIVSYGLGIYLLNLLIGFVSPLVDPELEPSDGPMLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTTRRQIAHMIKYKYVPFNIGKQVESIAVRSLLQEAVDLEQNEARLLLHALKDTHLLD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g1361 222 Pfam Rer1 family 30 187 IPR004932 GO:0016020
Lele46g1361 222 PANTHER PROTEIN RER1 18 189 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g1361 Lele-ChrLele46 20631413 20633580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g1361 11 190 Miscellaneous Gene Families AT2G21600 78.889 2.65e-106 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1361 46 20631413 20633580 Lele47g0141 47 1001144 1003069 hybridization
Lele46g1361 46 20631413 20633580 Lele48g0145 48 1710966 1713056 hybridization