Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0292 ATGAGCTTTGCCGCTTACAAGATGATGCACTGCCCAACGGGCATCGAGCATTGCGCTTCTGGGTTCATCACGCATTCTCGTGCCGACTTCGTACCTCAAACCCCACCGATTCAGACCGATGATCTTGACTCTGAGTGGCCGGCGAGGCGCGAAATTGGTCCCATTCCCAACCTCATTGTTACCGCGGCGAATGTCCTGGAAGTGTACATTGTGAGGGTGCAAGAACAAGTTAGCAGAGAGCCGAAGGGTCACGTGGAATCCAAGCGTGGTGGTCTCATGGATGGCATTACTGGGGCCTCGCTTGAGCTTGCTTGTCATTACAGGTTGCATGGTAATGTCGAAATGATGGACGTATTGGGCATTGGAGGTGGTGAAGCCTCTAGGAAGAGAGATTCTATCATCTTAACTTTTAAAGATGCGAAAATTTCAGTTCTGGAATATGATGATTCTATTCATGGACTTCGAATAAGCTGGATTAAGAGTGATTTTGCCCTACTTGAGGCATCTTTGGCAGGGATGGTTCTATCACTGGATGACATTTCTTGTGTGCAAAACATATCCCATAGCTTGAAGTTTGGAAAGTTATTGGGTGTTTTTCTGAGTGGTTCTATTTATGCAAGGTGTTCTTTGCTTGACTGTGCATGTATATACCTGCCTTTCTGTCTGAATTCTGTTGCTCATCTGTGGGCGGTTGCTCTTTTTGCTGGATCTGGTTTAGTTGTAGAGGATGATACCTTGGGTTCTGGAGGTGCAGTTGCTGCTCGTATTGAGTTCTCTTATATGATGAGTCTACGAGACTTGGACATGAGACATGTAAAAGATTTTACATTTGTACATGGTTATATTGAACCTGTGATGGTGATACTACATGAAAGGGAGCTTACTTGGGCTGGGAGTGTCTCATGGAAGCATCACACTTGCATGATATCTGCACTGAGTATCAGTACTACTTTGAAGCAGCATCCACTCATATGGTCAGCTGATTTAATTGACCCAATGTCTTGGTTCAGCCCTTTGAACAGGATAAGATTGCATCTTGTGATAACTTCTATAATGGATCTTCCTCATGATGCCTACAAGCTTCTTGCAGTGCCATCACCAATAGGTGGTGTTCTTGTGTTTGGTGCTAATACGATTCATTACCACAGTCAGTCTGCTTCATGTGCATTGGCGTTGAATAGTTATGCTGTTTCACTTGATAGTAGTCAAGAGATGCCAAGATCGAGTTTTAATGTGGAGCTTGATGCTGCTTATGTAACTTGGTTGTTGAGTGACATGGGCTTGCTGTCAACAAAAACTGGTGAATTGTTTCTGCTTACTCTTGTTTATGATGGAAGGGTCGTCCAGAGACTTGATCTTTCCAAATCAAGAGCTTCAGTTTTGTCATCCGGTATCACAACAATTGGGAATTCTTTGTTTTTCCTCGCTAGCCGATTAGGAGACAGTATGCTCTTCCAATTTTCTTGTGGATCTGGGGTTTCAATGTTGTCATCCAATCTAAAGGAAGAGGTTGGTGATATAGAAGGTGAGGCTCCTTCAGCAAAGCGACTACGCATGTCCCCTTCTGATGCCTTGCAAGATATGGTTAGTGGAGAGGAGTTCTCCCTGTTTGGATCTACCCCAAATAAAACAGAATCAGCACAGAAAACCTTCTCATTTGCCGTGAGGGATTCGTTGATTAATGTTGGTCCTTTGAAAGACTTCTCATATGGTTTAAGGATAAATGCTGATGCAAATGCAACTGGAATTGCTTATTACATGTGCTTCTTCTCCATGTTGATGGATTGGAGGGTGAGAAGAAGTGTTGTATGCTGTTCTGGTCATGGAAAGAATGGTTCGCTCTGTGTTCTTCGGCAATCAGTTTGTCCAGAAGTGATAACTGAGGTTGAACTTCCTGGTTGTGAAGGAATCTGGACTGTTTATCATAAGAACACACGCTCTCACAACGCTGATTCTTCTAAGTTGGCCGACGATGATGATGAGTATCATGCTTATCTTATCATAAGTTTGGAGGCCCGTACTATGGTAGTCATGACAGCCTACATTATAGTTGAATATGTGATATGTCAGATGGCTAATTGTTTGAGGGGTATTTCCTTGTCTTTAGATGTCCTAGGGGTACTGGAAACGGCAGATCTTTTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAGACACTTGCTGCAGGGAACTTATTTGGAAGGCGTCGAGTAATTCAAGTTTATGAACGCGGTGCTCGCATTCTAGATGGCTCATTTATGATCCAAGATGTAAGCTTTGGAGCTTCAAACTCTGAATCCAGTTCTGGATCTGAGAATGCTATTGTGGCATCTGTCTCTATTGCTGATCCATATGTATTACTCAGAATGAATCCTACTACCTGCTCTGTTTCTGTCACAACTCCTTCATTCGAAAACTCAAAGAATTCAGTATCTGCTTGCACACTTTACCATGATAAAGGACCTGACCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCAATTGATGGCACTGATGGTGCAGTTCAAGATCATGGGGATATTTATTGTGTTGTTTGTTATGAAAATGGTGCCCTTGAAATGTTTGATACCCCAAATTTCAGTTGTGTTTTTTCTGTGGAAAAATTTATGTCTGGAAAGAGCCACCTTGTTGATACTCTCGTGATGGAGGCATCAAAAGATTCTCAAAAAGTTGATGGAGGTTCTGGTGAAGTGACTAACCAAGGCAGGAAGGAAAATGTACAGAGTATGAAGGTTGTAGAGTTGGCCATGCAGAGATGGTCAGGGAAGTATAGCCGCCCATTTATTTTTGGTATCTTGAGTGATGGAACAATTCTTTGCTACCATGCTTACTTTTATGAAGGTTCAGATGGTACTTCCAAGGTGGAGGATTCAGCATCTGCACAAGGACCTGTGGGCCTAAATGGAACTAATGCTTCTAGGCTTAGAAATTTGAGATTTGTTCGCGTCCCCTTAGATGTATATGCCAGGGAGGAGATATCAAGTGGATCCCCTTCTCAGAGAATTACTACTTTCAAGAATATAGGTGGTTACCAAGGATTTTTCTTGTCGGGATCTAGACCTGCTTGGTTTATGGTGCTGAGAGAACGGCTTCGTGTTCATCCACAGCTATGCGATGGGTCTATTGTTGCTTTTACTGTTCTTCACAATGTGAACTGCAATCATGGTCTCGTATATGTTACGTCAAAGATTCCATTAAAAGCTACTCCTCATCAAGTAACCTACTTTGCAGAGAAGAATTTGTATCCGCTTATAGTCTCAGTTCCTGTTCTCAAGCCACTCAATCAAGTTGTTTCATCTTTGGGTGATCAAGAGGTCAACCAACAAACTGAGAATGAAAATCTGAGCTCTGATGAGCAAAACCGCTTTTACACTGTTGATGAATTTGAGATTCGGATTATGGAGCCAGATAAATCTGGTGGCCCTTGGCAAACAAAAGCAACAATACCTATGCAAAGTTCTGAAAATGCCCTTACTGTGAGAATGGTTACACTGCTGAATACAGAAACAAAAGAGAATGAAACGCTTTTAGCTATTGGCACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGGCGTGTCCTTCTGTTTTCTGTGGGAAAAAACACAGATAATAGTCAACCTCTGGTTTCAGAGGTCTACTCAAAAGAGTTGAAAGGTGCTATATCTGCTTTGGCCTCACTGCAAGGTCATCTATTAATAGCTTCTGGTCCAAAAATTATTCTGCACAAGTGGACTGGTAGTGAGCTGAATGGTATTGCATTTTTTGATGCTCCACCATTGCATGCTGTGAGCTTAAACATTGTCAAAAACTTTATACTTATTGGTGACATCCATAAAAGCATTTACTTCCTTAATTGGAAGGAACAGGGTGCTCAACTTAGCTTATTAGCCAAGGACTTTGGTTCTCTTGATTGTTTTGCAACCGAGTTTTTGATTGATGGAAGCACTTTGAGTCTCATGCTTTCCGATGATCAAAAGAACATCCAGATTTTTTACTACGCACCCAAGATGTCTGAAAGCTGGAAGGGACAGAAGCTTCTTTCAAGGGCTGAATTTCACGTTGGAGCACATGTGACTAAATTCTTGCGTTTGCAGATGCTGTCCACTGCCACTTCTGACCGGACTGGCACTGGTCCGGGCTCAGATAAAACAAATCGTTTTGCTTTATTATTTGGTACCCTGGATTGCAGTATCGGTTGCATTGTGCCACTGGATGAAATCACATTTCGGAGGCTGCAATCTTTGCAGAAAAAGCTTGTTGATGCTGTACCTCATGTTGCTGGCTTAAATCCAAAAGCTTTCAGGCAGTTTCGTTCCAATGGAAAGGCCCATCGACCAGGCCCTGACAGTATAGTTGACTGTGAGCTGCTATGCCACAGTTATGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTCACCAGATCAGGAAACCTTACTTCCCTGGTTTAGCCGAGTTCCTGACAACTGAGTTTATACCTCTTAGTTCATTTGCATTTGTTGCACCTTGCACCAATCAATGGATGCCACCATTAATGTGTAAATTTGTGTCTCTGATGGCTGAAATTTCTTCTGGTTTGGTGAGTGTGGAAAACGACATCGAGTGA 4668 0.4261 MSFAAYKMMHCPTGIEHCASGFITHSRADFVPQTPPIQTDDLDSEWPARREIGPIPNLIVTAANVLEVYIVRVQEQVSREPKGHVESKRGGLMDGITGASLELACHYRLHGNVEMMDVLGIGGGEASRKRDSIILTFKDAKISVLEYDDSIHGLRISWIKSDFALLEASLAGMVLSLDDISCVQNISHSLKFGKLLGVFLSGSIYARCSLLDCACIYLPFCLNSVAHLWAVALFAGSGLVVEDDTLGSGGAVAARIEFSYMMSLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGSVSWKHHTCMISALSISTTLKQHPLIWSADLIDPMSWFSPLNRIRLHLVITSIMDLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCALALNSYAVSLDSSQEMPRSSFNVELDAAYVTWLLSDMGLLSTKTGELFLLTLVYDGRVVQRLDLSKSRASVLSSGITTIGNSLFFLASRLGDSMLFQFSCGSGVSMLSSNLKEEVGDIEGEAPSAKRLRMSPSDALQDMVSGEEFSLFGSTPNKTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAYYMCFFSMLMDWRVRRSVVCCSGHGKNGSLCVLRQSVCPEVITEVELPGCEGIWTVYHKNTRSHNADSSKLADDDDEYHAYLIISLEARTMVVMTAYIIVEYVICQMANCLRGISLSLDVLGVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMIQDVSFGASNSESSSGSENAIVASVSIADPYVLLRMNPTTCSVSVTTPSFENSKNSVSACTLYHDKGPDPWLRKTSTDAWLSTGVGEAIDGTDGAVQDHGDIYCVVCYENGALEMFDTPNFSCVFSVEKFMSGKSHLVDTLVMEASKDSQKVDGGSGEVTNQGRKENVQSMKVVELAMQRWSGKYSRPFIFGILSDGTILCYHAYFYEGSDGTSKVEDSASAQGPVGLNGTNASRLRNLRFVRVPLDVYAREEISSGSPSQRITTFKNIGGYQGFFLSGSRPAWFMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLVYVTSKIPLKATPHQVTYFAEKNLYPLIVSVPVLKPLNQVVSSLGDQEVNQQTENENLSSDEQNRFYTVDEFEIRIMEPDKSGGPWQTKATIPMQSSENALTVRMVTLLNTETKENETLLAIGTAYVQGEDVAARGRVLLFSVGKNTDNSQPLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELNGIAFFDAPPLHAVSLNIVKNFILIGDIHKSIYFLNWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMLSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTATSDRTGTGPGSDKTNRFALLFGTLDCSIGCIVPLDEITFRRLQSLQKKLVDAVPHVAGLNPKAFRQFRSNGKAHRPGPDSIVDCELLCHSYEMLPLEEQLEIAHQIRKPYFPGLAEFLTTEFIPLSSFAFVAPCTNQWMPPLMCKFVSLMAEISSGLVSVENDIE 1555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0292 1555 Gene3D - 1058 1423 IPR015943 GO:0005515
Lele46g0292 1555 Pfam CPSF A subunit region 1147 1478 IPR004871 GO:0003676|GO:0005634
Lele46g0292 1555 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 8 1497 - -
Lele46g0292 1555 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 330 793 IPR018846 -
Lele46g0292 1555 Gene3D - 55 498 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0292 Lele-ChrLele46 1917901 1936736 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0292 46 1917901 1936736 Lele46g0292 46 1917901 1936736 ECH
Lele46g0292 46 1917901 1936736 Lele47g1117 47 16792824 16805147 hybridization
Lele46g0292 46 1917901 1936736 Lele48g1180 48 16314185 16325350 hybridization