Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0148 ATGTCTCAGGTGGTGGCCACGCGCTCCATTCACAGCTCCTTCCTTCGCCCCAACCCTGGATCTGCACAGCCCAGAGCTGAAAACTTGTTAAAGCCTTCCACTTTTGCTTTCAATGTCTTCTCACCTAAGAAGACTTCCAAACTTGGTTTTCGCAGAAGGTCATGCCAGATCGTTGCAAGGAAAGCTGCTATTTCAGCTACTGAAGTAGTTCCCGTATCACCCGAGGATGAGTTGAAGATTGAGGAGCAGTTGCAGCAGTTGCGTGTAATCCCGCAATTCGGTGACACTTCAGCTGGTATGTGGTCGAAGCCCACGGTTAGACGGAAGACGAAGATAGTTTGTACGATTGGTCCTTCTACTAATACTCGGGAAATGATCTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGCCTCAATATGTCTCATGGGGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAGGAGTATAATGCACAATCTAAGGATAATGTGATCTCGATTATGCTTGACACCAAGGGCCCTGAGGTTAGGAGTGGGGATTTGCCACAACCAATCATGTTGACGCCTGGTCAGGAATTCACTTTTACAATTCAGAGGGGTGTTGGAACTCCAGACTGTGTCAGTGTGAACTACGATGATTTTGTCAATGATGTGGAAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTGATGGTTAAATCAAAGACGGCTGATTCAGTGAAATGTGAAGTTGTTGATGGAGGCGAGCTCAAATCAAGGCGACATTTGAATGTTAGAGGAAAAAGTGCAACACTGCCTTCCATTACTGAGAAGGACTGGGATGACATCAAATTTGGAGTGGATAACCAAGTTGACTTTTATGCTGTTTCCTTTGTTAAGGATGCTCAAGTTGTTCACGAATTGAAGAATTATTTAAAAAGCTGTGGTGCTGATATACATGTCATCGTGAAGATTGAAAGTGCAGACTCTATACCAAACTTACACTCAATTATTACAGCTTCTGATGGGGCAATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTTCCTATTGAGGAGGTTCCACTTTTGCAGGAAGAGATAATCAATATTTGCCGTAGCATGGGGAAGGCCGTTATAGTAGCAACTAATATGCTGGAAAGCATGATTGTACACCCTACACCAACCAGAGCAGAAGTATCAGATATTGCAATTGCTGTTCGTGAAGGTTCTGATGGAATTATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTGAAAGCTGTGAAAGTAATGCACACAGTAGCTTTACGGACAGAAGCAACCATTCCAGGTGGTCAAATGCCACCTAATCTTGGCCAAGTATTCAAGAACCACACGAGTGAGATGTTTGCATACCATGCGACAATGATGTCTAATACCCTTGGAACCTCTACTGTAGTCTTCACTAGATCAGGTTTTATGGCTATCCTACTGAGCCACTATCGACCTTCGGGCACTATCTTTGCTTTTACTGATAATAAGAGGATACAACAGCGGCTGGCTTTGTATCAAGGGGTGTGTCCCATATATATGGAATTTTCTGACGATGCGGAGGAGACTTTCACCAGAGCGCTAGGTTTACTACAGAAGCAAGGAATGGTAAAGAAAGGAGAAGAAGTGGCCCTTGTACAGAGTGGCAGGCAACCCATATGGAGGTCCCAGTCCACTCACAACATCCAGGTCCGGCAAGTTGTAGTATGTGGGATTGAATTTTGCTAG 1758 0.4477 MSQVVATRSIHSSFLRPNPGSAQPRAENLLKPSTFAFNVFSPKKTSKLGFRRRSCQIVARKAAISATEVVPVSPEDELKIEEQLQQLRVIPQFGDTSAGMWSKPTVRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPIMLTPGQEFTFTIQRGVGTPDCVSVNYDDFVNDVEVGDMLLVDGGMMSLMVKSKTADSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNLGQVFKNHTSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPSGTIFAFTDNKRIQQRLALYQGVCPIYMEFSDDAEETFTRALGLLQKQGMVKKGEEVALVQSGRQPIWRSQSTHNIQVRQVVVCGIEFC 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0148 585 Gene3D - 110 435 IPR040442 -
Lele46g0148 585 Pfam Pyruvate kinase, alpha/beta domain 465 558 IPR015795 -
Lele46g0148 585 PRINTS Pyruvate kinase family signature 290 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PRINTS Pyruvate kinase family signature 397 415 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PRINTS Pyruvate kinase family signature 416 432 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PRINTS Pyruvate kinase family signature 372 396 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PRINTS Pyruvate kinase family signature 347 371 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PRINTS Pyruvate kinase family signature 166 182 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PRINTS Pyruvate kinase family signature 320 346 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 Pfam Pyruvate kinase, barrel domain 108 443 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 PANTHER PYRUVATE KINASE 96 555 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele46g0148 585 SUPERFAMILY PK C-terminal domain-like 426 577 IPR036918 -
Lele46g0148 585 SUPERFAMILY PK beta-barrel domain-like 177 268 IPR011037 -
Lele46g0148 585 ProSitePatterns Pyruvate kinase active site signature. 318 330 IPR018209 GO:0004743|GO:0006096
Lele46g0148 585 MobiDBLite consensus disorder prediction 1 25 - -
Lele46g0148 585 Gene3D - 178 271 IPR015806 GO:0004743|GO:0006096
Lele46g0148 585 FunFam Pyruvate kinase 273 438 - -
Lele46g0148 585 MobiDBLite consensus disorder prediction 1 19 - -
Lele46g0148 585 Gene3D - 450 578 IPR036918 -
Lele46g0148 585 FunFam Pyruvate kinase 439 558 - -
Lele46g0148 585 FunFam Pyruvate kinase 178 271 - -
Lele46g0148 585 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 101 442 IPR015813 GO:0003824
Lele46g0148 585 TIGRFAM pyruv_kin: pyruvate kinase 108 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0148 Lele-ChrLele46 889400 894283 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0148 46 889400 894283 Lele46g0148 46 889400 894283 ECH
Lele46g0148 46 889400 894283 Lele47g1173 47 17194575 17199572 hybridization
Lele46g0148 46 889400 894283 Lele48g1308 48 17312388 17316898 hybridization