Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1269 ATGGAGGGAGCTGGAGGTGGCAGTGCTTCGGCTGCTGCACCTGTAAACCAGGGGGTGCAGGACTTTATGAGGCTCTTTCAATATTATCTGGATAAAACTACTCCTCATACTACGTATAGATGGATTGGGACTTTGGTTTTGGCATCAATCTATGCTTTGAGGGTTTATTATGTCCAAGGATTCTACATTGTGTCTTATGGTCTGGGAATCTATTTGCTGAATCTGTTGATTGGGTTTCTGTCCCCTTTGGTTGATCCGGAGATGGAACCTTCAGATGGACCTCTGCTGCCAACTAAAGGTTCTGATGAGTTCAAACCTTTCATTCGCCGACTTCCTGAATTTAAGTTCTGGTATTCTTTCACAAAAGCTTTCTGCATAGCTTTTGTCATGACCTTCTTTTCTGTATTTGATGTCCCTGTCTTTTGGCCTATATTACTCTGTTACTGGATTGTTCTGTTTGTCCTTACCATGAAGCGCCAAATTGTACACATGATCAAATACAAATATGTCCCATTCAACATCGGAAAGCAGAAGTATAGCGGTAAGAAGCCTTCTGCAAGTAGCATTGGATCTCGTGCAGAATGA 585 0.4239 MEGAGGGSASAAAPVNQGVQDFMRLFQYYLDKTTPHTTYRWIGTLVLASIYALRVYYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPEMEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIVHMIKYKYVPFNIGKQKYSGKKPSASSIGSRAE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1269 194 Pfam Rer1 family 20 180 IPR004932 GO:0016020
Lele45g1269 194 PANTHER PROTEIN RER1 9 185 IPR004932 GO:0016020
Lele45g1269 194 PIRSF AtER_Rer1p 1 189 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1269 Lele-ChrLele45 22615330 22617218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1269 1 194 Miscellaneous Gene Families AT2G21600 77.949 1.13e-112 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1269 45 22615330 22617218 Lele47g0141 47 1001144 1003069 hybridization
Lele45g1269 45 22615330 22617218 Lele48g0145 48 1710966 1713056 hybridization