Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0282 ATGTTTGTTGGGAGTTGTGAATCCAAGCCCAAGTTCCCAGAAGTTTCTCGCTTTGTTACCATGGCCTATGTGGGAATATCCCCAAACCACTCTTTGCTTTTCTCAGGAACCAAACACTCTCTTCATCTTCCTTCCACAAGGAGAAGTGTAGTTTCAGTACGAGCTGAAAGCATGACGATCGAGAAATTAGGAATCAAGATAGAAAGAAATCCTCCTGAGGACAAACTTACACAACTTGGCGTGAAACGATGGCCCAAGTGGGGATGCCCTCCGAGCAAATTCCCATGGACTTATGAAGCGAAGGAGACGTGCTATCTGTTGGAAGGGAAAGTGAAGGTGACACCAAGGGGATCAAATGAAGCAGTTGAGATTGGTGCTGGCGACTTGGTTGTGTTCCCAAAAGGGATGAGTTGCACTTGGGATGTCTCCGTTGGAGTGGACAAGCACTATCAATTTGAATAA 462 0.461 MFVGSCESKPKFPEVSRFVTMAYVGISPNHSLLFSGTKHSLHLPSTRRSVVSVRAESMTIEKLGIKIERNPPEDKLTQLGVKRWPKWGCPPSKFPWTYEAKETCYLLEGKVKVTPRGSNEAVEIGAGDLVVFPKGMSCTWDVSVGVDKHYQFE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0282 153 CDD cupin_TM1112-like 83 152 - -
Lele45g0282 153 SUPERFAMILY RmlC-like cupins 74 150 IPR011051 -
Lele45g0282 153 PANTHER OS04G0445200 PROTEIN 44 153 - -
Lele45g0282 153 Pfam EutQ-like cupin domain 77 150 IPR008579 -
Lele45g0282 153 Gene3D Jelly Rolls 53 152 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0282 Lele-ChrLele45 2297738 2299493 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0282 45 2297738 2299493 Lele45g0282 45 2297738 2299493 ECH
Lele45g0282 45 2297738 2299493 Lele47g1104 47 16685608 16688593 hybridization
Lele45g0282 45 2297738 2299493 Lele48g1167 48 16225655 16227295 hybridization