Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g1167 ATGATCAGTGTTGGCAGTTGTGAATCCAAGCCCAAGTTCCTAGAAGTTTCTCGCTTTGTTACAATGGCCTGTGTGGGAATATCCCCAAACCACTCTTTGCTTTTCTCAGAAACCAAACACTCTCGAATTCATCTTCCTTCCACAAGGAGAAGTCTAGTTGCAGTACGAGGTGCAAGCATGACGATCGAGAAATTAGGCATCAAGATAGAAAGAAATCCTCCTGAGGACAAACTTACACAACTTGGCGTTAAACAATGGCCCAAGTGGGGATGCCCTCCGAGCAAATTCCCATGGACTTATGAAGCGAAGGAGACATGCTATCTGTTGCAAGGGAAGGTGAAGGTGACGCCCACTGGATCAAATGAAGCAGTTGAGATTGGTGCTGGTGACTTGGTTGTGTTCCCAAAAGGGATGAGTTGCACTTGGGATGTCTCTGTTGGAGTGGACAAGCACTATCAATTTGAATAA 468 0.4573 MISVGSCESKPKFLEVSRFVTMACVGISPNHSLLFSETKHSRIHLPSTRRSLVAVRGASMTIEKLGIKIERNPPEDKLTQLGVKQWPKWGCPPSKFPWTYEAKETCYLLQGKVKVTPTGSNEAVEIGAGDLVVFPKGMSCTWDVSVGVDKHYQFE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g1167 155 SUPERFAMILY RmlC-like cupins 76 152 IPR011051 -
Lele48g1167 155 Pfam EutQ-like cupin domain 79 152 IPR008579 -
Lele48g1167 155 CDD cupin_TM1112-like 86 154 - -
Lele48g1167 155 Gene3D Jelly Rolls 56 154 IPR014710 -
Lele48g1167 155 PANTHER OS04G0445200 PROTEIN 37 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g1167 Lele-ChrLele48 16225655 16227295 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele48g1167 48 16225655 16227295 Lele48g1167 48 16225655 16227295 ECH
Lele45g0282 45 2297738 2299493 Lele48g1167 48 16225655 16227295 hybridization
Lele46g0306 46 2038196 2040811 Lele48g1167 48 16225655 16227295 hybridization