Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1104 ATGTCTATGATGCTTGTTGGGAGTTGTGAATCCAAGCCCAAGTTCCCAGAAGTTTCTCGCTTTGTTACAATGGCCTATGTGGGAATATCCCCAAACCACTCTTTGCTTTTCTCAGGAACCAAACACGCTCTTGATCTTCCTTCCACGAGGAGAAGTGTAGTTTCAGTACGAGCTAAAAGCATGACGATTGAGAAATTAGGAATCAAGATAGAAAGAAATCCTCCTGAGGACAAAATTAGACAACTTGGCGTTAAACAATGGCCCAAGTGGGGATGCCCTCCGAGCAAATTCCCATGGACTTATGAAGCGAAGGAGACGTGCTATCTGTTGGAAGGGAAAGTGAAGGTGACACCAAATGGATCAAATGAAGCAGTTGAGATTGGTGCTGGTGACTTGGTTGTGTTCCCAAAAGGGATGAGTTGCACTTGGGATGTCTCCGTTGGAGTGGACAAGCACTATCAATTTGAATAA 471 0.4459 MSMMLVGSCESKPKFPEVSRFVTMAYVGISPNHSLLFSGTKHALDLPSTRRSVVSVRAKSMTIEKLGIKIERNPPEDKIRQLGVKQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVTPNGSNEAVEIGAGDLVVFPKGMSCTWDVSVGVDKHYQFE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1104 156 Gene3D Jelly Rolls 56 155 IPR014710 -
Lele47g1104 156 PANTHER OS04G0445200 PROTEIN 53 156 - -
Lele47g1104 156 SUPERFAMILY RmlC-like cupins 81 153 IPR011051 -
Lele47g1104 156 CDD cupin_TM1112-like 87 155 - -
Lele47g1104 156 Pfam EutQ-like cupin domain 81 153 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1104 Lele-ChrLele47 16685608 16688593 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1104 47 16685608 16688593 Lele47g1104 47 16685608 16688593 ECH
Lele45g0282 45 2297738 2299493 Lele47g1104 47 16685608 16688593 hybridization
Lele46g0306 46 2038196 2040811 Lele47g1104 47 16685608 16688593 hybridization