Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0269 ATGAGCTTTGCTGCTTACAAGATGATGCACTGCCCAACGGGGATCGAGAATTGCGCTTCTGGGTTCATCACTCATTCTCGTGCCGACTTCGTACCTCAAATACCACCGATTCAGACCGATGATCTTGACTCGGAGTGGCCAGCGAGGCGCGAAATCGGTCCCATTCCCAACCTCATTGTTACTGCAGCGAATGTCCTGGAAGTGTACATTGTGAGGGTGCAAGAAGAAGTTAGCAGAGAGCCGAAGGTTAATGTGGAATCCAAGCGTGGTGGTCTGATGGATGGCATTACTGGAGCCTCGCTTGAGCTTGCTTGTCATTACAGGTTGCATGGTAATGTCGAAACCATGGATGTATTGAGCATTGGAGGTGGTGAAGCTTCTAGAAAGAGAGATTCTATCATCTTAACTTTTAAAGATGCGAAAATTTCAGTTCTGGAATATGACGATTCTATTCATGGACTTCGAATAAGTTCTTTGCATTGTTTTGAGGGTCCGGAGTGGCTCCATTTAAAAAGAGGCAGAGAACAATTTGCAAGAGGCCCATTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGCGGAGTTCTTGTCTATGATTTGCAAATGATTATACTTAAGGCTACTCAGGCTGGATCTGGTTTAGTTGTAGAGGATGATGCCTTGGGTTCTGGAGGTGCAGTTGCTGCTCGTATTGAGTCTTCGTATATGATGAGTCTACGAGACTTGGACATGAGACATGTAAAAGATTTTACATTTGTACATGGTTATATTGAACCTGTGATGGTGATACTACATGAAAGGGAGCTTACTTGGGCTGGGTGTGTCTCATGGAAGCATCACACTTGCATGATATCTGCACTGAGTATCAGTACAACTTTGAAGCAGCATCCACTCATATGGTCAGCTGCTAATCTTCCTCATGATGCCTATAAGCTTCTTGCAGTGCCATCACCAATAGGTGGTGTTCTTGTGTTTGGTGCTAATACTATTCATTACCACAGTCAGTCTGCTTCATGTGCATTGGCGTTGAATAGTTATGCTGTTCCACTTGATAGTAGTCAAGAGATGCCAAGATCGAGTTTTAATGTGGAGCTTGATGCTGCCTTTGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGTGAATTGTTGTTGCTTACTCTTGTTTATGATGGAAGGGTCGTCCAGAGACTTGATCTTTCCAAATCAAAAGCTTCAGTTTTGTCATCCGGTATCACAACAATTGGGAATTCTTTGTTTTTCCTTGCTAGCCGATTGGGAGACAGTATGCTGGTGCAATTTTCTTGTGGAGATGGGGTTTCAATGTTGTCATCCAATCTAAAGGAAGAGGTTGGTGATATAGAAGGTGATGCTCCTTCAGCAAAGCGACTACGCAGGTCCCCTTCTGATGCTTTGCAAGATATTGTTAGCGGTGAGGAGCTCTCCCTGTTTGGATCTACCCCAAATAAAACAGAATCGGCACAGAAAACCTTCTCGTTTGCAGTGAGGGATTCGTTGATTAATGTTGGTCCTTTGAAAGACTTCTCATATGGTTTAAGGATAAATGCCGATGCAAATGCAACCGGAATTGCTAAACAAAGTAACTATGAACTGGTATGCTGTTCTGGTCATGGAAAGAATGGTTCGATCTGTGTTCTTCGGCAATCAGTTCGTCCAGAAGTGATAACTGAGGTCGAACTTCCTGGTTGCAAAGGAATCTGGACTGTTTATCATAAGAACACCCGCTCTCATAACGCTGATTCTTCTAAGTTGGCTGATGATGACGATGAGTATCATGCTTATCTTATCATAAGTTTGGAGGCTCGTACTATGATACTGGAAACAGCTGATCTTTTGAGCGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAGACACTTGCTGCAGGGAATTTATTTGGAAGGCGTCGTGTAATTCAAGTTTATGAACGTGGTGCTCGCATTCTAGATGGCTCATTTATGACCCAAGATGTAAGCCTTGGAGCTTCAAACTCTGAATCCAGTTCTGGATCTGAGAATGCTATTGTGTCATCTGTCTCTATTGCTGATCCATATGTATTACTCAGAATGAGTGATGGAAGCATTCGACTTTTGGTTGGAGATCCTACTACCTGCTCTGTTTCTGTCACAACTCCTTCATTCGAAAACTCAAAAAATTCAGTATCTGCTTGCACACTTTACCATGATAAAGGACCTGACCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTGTTGGTGAGGCAATTGATGGCGCTGATGGTGCAGTTCAAGATCATGGGGATGTTTATTGTGTTGTTTGTTATGAAAATGGTGCCCTTGAAATGTTTGATACCCCAAATTTCAGTTGTGTTTTTTCTGTGGAAAAATTTATGTCTGGAAAGAGCCACCTTGTTGATACTCTCGTGATGGAGGCATCAAAAGATTCTCAAAAAGTTGATGGAGGTTCTGGTGAAGTGACTAACCAAGTTAGGAAGGAAAATGTACAGAGTATGAAGGTTGTAGAGTTAGCTATGCAGAGATGGTCAGGGAAGTATAGCCGCCCATTTATTTTTGGGATCTTGAGTGATGGAACAATTCTTTGTTACCATGCTTACTTTTATGAAGGCTCAGATGGTACTTCCAAGGTGGAGGATTCAGCATCTGCACAAGGACCTGTGGGCCTAAATGGAACTAATGCTTCTAGGCTTAGAAATTTGAGATTTGTTCGCGTCCCCTTAGATGTATATGCCAGGGAGGAGATATCAAGTGGATCTCTTTCTCAGAGAATTACTATTTTCAAAAATATAGGTGGTTACCAAGGATTTTTCTTGTCGGGGTCTAGACCTGCTTGGGTTATGGTGCTGAGAGAACGGCTTCGTGTTCATCCACAGCTATGCGATGGGTCTACTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCATGGTCTCATATATGTTACATCACAGGGTGTTTTAAAGATTTGCCAACTGCCTTCTGGCTCAAGCTATGATAGCTACTGGCCTGTACAGAAAATTCCGTTAAAAGCTACTCCTCATCAAGTAACCTACTTTGCAGAGAAGAATTTATATCCGCTTATAGTCTCAGTTCCTGTTCTCAAGCCACTTAATCAAGTTGTTTCATCTTTGGGTGATCAAGAGGTCAACCAACAAACTGAGAATCAAAATCTGAGCTCTGATGAGCAAAACCGCTTTTACACTATTGATGAATTTGAGATCCGTATTATGGAGCCAGATAAATCTGGTGGCCCTTGGCAAACAAAAGCAACAATACCTATGCAAAGTTCTGAAAATGCCCTTACTGTGAGAATGGTTACACTGCTGAATACAGAAACAAAGGAGAATGAAGCACTTTTAGCTATTGGCACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGGCGTGTCCTTCTGTTTTCTTTGGGGAAAAACACCGATAATAGTCAACCTCTGGTTTCAGAGGTCTACTCGAAAGAGTTGAAAGGTGCTATATCTGCTTTGGCCTCACTGCAAGGTAATCTATTAATAGCTTCTGGTCCAAAAATTATTCTGCACAAGTGGACTGGTAGTGAGCTGAATGGTATTGCATTTTTTGATGCTCCACCATTGCATGCTGTGAGCTTAAACATTGTCAAAAACTTTATACTTATTGGTGACATCCATAAAAGCATTTACTTCCTTAATTGGAAGGAACAGGGTGCTCAACTTAGTTTATTAGCCAAGGACTTCGGTTCTCTTGATTGTTTTGCAACCGAGTTTTTGATTGATGGAAGCACTTTGAGTCTCATGGTTTCCGATGATCAAAAGAACATCCAGATTTTTTACTATGCACCAAAGATGTCTGAAAGCTGGAAGGGACAGAAGCTTCTTTCAAGGGCTGAATTTAATGTTGGAGCACATGTGACTAAATTCTTGCGTTTGCAGATGCTGTCCACTGCCTCTTCTGACCGGACTGGCACTGGTCCGGGCTCAGATAAAACAAATCGTTTTGCTTTATTATTTGGTACCCTGGATGGCAGTATCGGTTGCATTGCACCGCTGGATGAAATCACATTTCGGAGGCTGCAATCTTTGCAGAAAAAGCTTGTTGATGCTGTACCTCATGTTGCTGGCTTAAATCCAAAAGCTTTCAGACAGTTTCGTTCCAATGGAAAGGCTCATCGACCAGGCCCTGACAGCATAGTTGACTGTGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGCAACAGCTTGAAATTGCTCACCAGGTTGGAACAACTCGATCGCAAATTATATCAAATCTGATTGACCTGTCTATTGGAACAAGCTTTTTGTGA 4371 0.4248 MSFAAYKMMHCPTGIENCASGFITHSRADFVPQIPPIQTDDLDSEWPARREIGPIPNLIVTAANVLEVYIVRVQEEVSREPKVNVESKRGGLMDGITGASLELACHYRLHGNVETMDVLSIGGGEASRKRDSIILTFKDAKISVLEYDDSIHGLRISSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLVYDLQMIILKATQAGSGLVVEDDALGSGGAVAARIESSYMMSLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGCVSWKHHTCMISALSISTTLKQHPLIWSAANLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCALALNSYAVPLDSSQEMPRSSFNVELDAAFATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGDGVSMLSSNLKEEVGDIEGDAPSAKRLRRSPSDALQDIVSGEELSLFGSTPNKTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSICVLRQSVRPEVITEVELPGCKGIWTVYHKNTRSHNADSSKLADDDDEYHAYLIISLEARTMILETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSLGASNSESSSGSENAIVSSVSIADPYVLLRMSDGSIRLLVGDPTTCSVSVTTPSFENSKNSVSACTLYHDKGPDPWLRKTSTDAWLSTGVGEAIDGADGAVQDHGDVYCVVCYENGALEMFDTPNFSCVFSVEKFMSGKSHLVDTLVMEASKDSQKVDGGSGEVTNQVRKENVQSMKVVELAMQRWSGKYSRPFIFGILSDGTILCYHAYFYEGSDGTSKVEDSASAQGPVGLNGTNASRLRNLRFVRVPLDVYAREEISSGSLSQRITIFKNIGGYQGFFLSGSRPAWVMVLRERLRVHPQLCDGSTVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSSYDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVLKPLNQVVSSLGDQEVNQQTENQNLSSDEQNRFYTIDEFEIRIMEPDKSGGPWQTKATIPMQSSENALTVRMVTLLNTETKENEALLAIGTAYVQGEDVAARGRVLLFSLGKNTDNSQPLVSEVYSKELKGAISALASLQGNLLIASGPKIILHKWTGSELNGIAFFDAPPLHAVSLNIVKNFILIGDIHKSIYFLNWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFNVGAHVTKFLRLQMLSTASSDRTGTGPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQKKLVDAVPHVAGLNPKAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEQQLEIAHQVGTTRSQIISNLIDLSIGTSFL 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0269 1456 FunFam Cleavage and polyadenylation specificity factor subunit 1 53 446 - -
Lele45g0269 1456 Pfam CPSF A subunit region 1087 1421 IPR004871 GO:0003676|GO:0005634
Lele45g0269 1456 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 8 1441 - -
Lele45g0269 1456 Gene3D - 976 1363 IPR015943 GO:0005515
Lele45g0269 1456 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 131 705 IPR018846 -
Lele45g0269 1456 FunFam cleavage and polyadenylation specificity factor subunit 1 975 1363 - -
Lele45g0269 1456 Gene3D - 55 447 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0269 Lele-ChrLele45 2181504 2193878 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0269 45 2181504 2193878 Lele45g0269 45 2181504 2193878 ECH
Lele45g0269 45 2181504 2193878 Lele47g1117 47 16792824 16805147 hybridization
Lele45g0269 45 2181504 2193878 Lele48g1180 48 16314185 16325350 hybridization