Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0124 ATGAAAAAAGGGCTTCGAAAGCTAAGCCGAGAGAGAGAGCCCTATTCATTTCCCTCGATACAAACGAGGCGTCCCTCTTCTTCTTTTGTCATCTCAAAAGCTCCGCTAAATTTTGCGGCGATTTCTCCAACTTCCTTCTATAATTCCACCTTCCTTCTTTCTCGACCTCACATACACACAACCCTTCTACTTCTTCCTCCTCACATATCTCCTTCTCACACTCTTCCACTTCCAACCATAATGTCTCATGTGGTGGCCACGCGCTCCATTCACAGCTCCTTCCAATGCCCCAACCCTGGATCTGCACAGCCCAGGGCTGAAAACTTGTTAAAGCCTTCCACTTTTGCTTTCAATGTCTTCTTACCTAAGAAGACTTCCAAACTTGGTTTACGCAGAAGGTCTTGCCAGATCGTTGCAAGGAAAGCTGCTATTTCAGCTACTGAAGTAGTTCCCGTATCACCCGAGGATGATTTGAAGATTGAGGAGCAGTTGCGTGTAATCCCGCAATTCGGTGACACTTCAGCTGGTATGTGGTCGAAGCCCACGTTTAGACGGAAGACGAAGGTAGTTTGTACGATTGGCCCTTCTACTAATACTCGGGAAATGATCTGGAAGCTGGCTGAGGCTGGCATGAATGTTGCTCGCCTCAATATGTCTCATGGGGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAGGAGTATAATGCACAATCTAAGGATAATGTGATATCGATTATGCTTGACACCAAGGGCCCTGAGGTTAGGAGTGGGGATTTGCCGCAACCAATCACGTTGACGCCTGGTCAGGAATTCGCTTTTACAATCCAGAGGGGTGTTGGAACTCCAGACTGTGTCAGTGTGAACTATGATGATTTTGTCAATGATGTGGAAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCACTAATGGTTAAATCAAAGACGGATGATTCAGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTCAAATCAAGGCGACATTTGAATGTTCGAGGAAAAAGTGCAACACTTCCTTCCATTACTGAAAAGGACTGGGATGACATCAAATTTGGAGTAGATAACCAAGTTGACTTTTATGCTGTTTCCTTTGTTAAGGATGCTCAAGTGGTTCACGAATTGAAGAATTATTTAAAGAATTGTGGTGCTGATATACATGTCATCGTGAAGATTGAAAGTGCAGACTCTATACCAAACTTGCACTCAATTATTACAGCTTCTGATGGGGCAATGGTCGCAAGAGGAGATCTTGGTGCTGAGCTTCCTATTGAGGAGGTTCCACTTTTGCAGGAAGAGATAATTAATATTTGTCGTAGCATGGGGAAGGCTGTTATTGTAGCAACTAATATGCTGGAAAGCATGATTGTACACCCTACACCAACCAGAGCAGAAGTATCAGATATTGCAATTGCTGTTCGTGAAGGTTCTGATGGAATTATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTGAAAGCTGTGAAAGTAATGCACACAGTAGCTTTACGGACAGAAGCAACCATTCCGGGTGGTCAAATGCCACCTAATCTTGGCCAAGTATTCAAGAACCACATGAGTGAGATGTTTGCTTACCATGCGACAATGATGTCTAATACCCTTGGAACCTCGACTGTAGTCTTCACTAGATCAGGTTTTATGGCTATCCTACTGAGCCACTATAGACCTTCTGGCACCATATTTGCTTTTACTGATAATAAGAGGATACAACAGAGGCTGGCTTTGTATCAAGGGGTGTGTCCCATATATATGGAATTTTCTGACGATGCGGAGGAGACTTTCACCAGAGCGCTAGGTTTACTCCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTGGCCATTGTACAGAGTGGCAGGCAACCCATATGGAGGTCCCAGTCGACTCACAACATCCAGGTCCGGCAAGTGTAA 1965 0.4453 MKKGLRKLSREREPYSFPSIQTRRPSSSFVISKAPLNFAAISPTSFYNSTFLLSRPHIHTTLLLLPPHISPSHTLPLPTIMSHVVATRSIHSSFQCPNPGSAQPRAENLLKPSTFAFNVFLPKKTSKLGLRRRSCQIVARKAAISATEVVPVSPEDDLKIEEQLRVIPQFGDTSAGMWSKPTFRRKTKVVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPITLTPGQEFAFTIQRGVGTPDCVSVNYDDFVNDVEVGDMLLVDGGMMSLMVKSKTDDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKNCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNLGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPSGTIFAFTDNKRIQQRLALYQGVCPIYMEFSDDAEETFTRALGLLQKQGMVKEGEEVAIVQSGRQPIWRSQSTHNIQVRQV 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0124 654 Gene3D - 527 654 IPR036918 -
Lele45g0124 654 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 177 519 IPR015813 GO:0003824
Lele45g0124 654 PRINTS Pyruvate kinase family signature 474 492 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 PRINTS Pyruvate kinase family signature 243 259 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 PRINTS Pyruvate kinase family signature 367 381 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 PRINTS Pyruvate kinase family signature 449 473 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 PRINTS Pyruvate kinase family signature 493 509 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 PRINTS Pyruvate kinase family signature 397 423 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 PRINTS Pyruvate kinase family signature 424 448 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 FunFam Pyruvate kinase 255 348 - -
Lele45g0124 654 MobiDBLite consensus disorder prediction 1 20 - -
Lele45g0124 654 ProSitePatterns Pyruvate kinase active site signature. 395 407 IPR018209 GO:0004743|GO:0006096
Lele45g0124 654 Pfam Pyruvate kinase, barrel domain 185 520 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 SUPERFAMILY PK beta-barrel domain-like 254 345 IPR011037 -
Lele45g0124 654 FunFam Pyruvate kinase 516 635 - -
Lele45g0124 654 TIGRFAM pyruv_kin: pyruvate kinase 185 654 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele45g0124 654 FunFam Pyruvate kinase 350 515 - -
Lele45g0124 654 Gene3D - 255 348 IPR015806 GO:0004743|GO:0006096
Lele45g0124 654 SUPERFAMILY PK C-terminal domain-like 503 654 IPR036918 -
Lele45g0124 654 Pfam Pyruvate kinase, alpha/beta domain 542 635 IPR015795 -
Lele45g0124 654 Gene3D - 187 512 IPR040442 -
Lele45g0124 654 PANTHER PYRUVATE KINASE 176 632 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0124 Lele-ChrLele45 1155135 1160079 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0124 45 1155135 1160079 Lele45g0124 45 1155135 1160079 ECH
Lele45g0124 45 1155135 1160079 Lele47g1173 47 17194575 17199572 hybridization
Lele45g0124 45 1155135 1160079 Lele48g1308 48 17312388 17316898 hybridization