Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0579 ATGCCGGAGCTACCGGAGGTAGAGGCGGCTAGAAGAGCCGTGGAAGATAACGGTATCGGCAAGAAGATAAAGAAGGCGATCATAGCCGACGATTCCAAAGTCATCGATGGAGTCTCTCGCTCGGAGTTCGAGGCTTCCCTCTTGGGCAAGACCATCGTTGCAGCTCGCCGTAAGGGCAAGAACATGTGGCTTGAGCTTGATTCCTCACCATTTCCTTCTTTCCAATTCGGCTTCACTGGCGGTCTGTGTGCTGTGTTTCGAAATGGGAATGAGATAAAGAGGGTAGTTGGCTGGATAATGGCTTGGAGGTGTCCTTCACTGACAAAAGGCGGTTCGCTAGAGTTCGCCTTCTCAATGATAGTTTTATTTCGGGCAAGAATTCATCCGAGGCAGACGGCTTCTAGTCTGTCCAAAGAAAACTGCTCAACTTTGCACAAGAGCATTAAAGAGGTGGGATTCTTTTTACAGGTCATTGAAAAAGCAGTTGAAGTTGGAGCTGATAGTAGCCAGTATCCTGCCGGTTGGATATTTCATTCACGTGAAAAGAAGCCGGGCAAGGCTATTGCGGATGGGAAAAAGATTGACTTTATTACAGCAGGAGGCAGGACGAGCGCTTATGTCCCAGAGTTGCAAAAGCGAAGTGGGTCACAGGATGTAAAAGTAGCTGGCAAACCTAAAAAGCGAACTTCAAAGAAAAACAAAGGCGAATATGACGATGATGATAATGACGATGACACTGAGGAACCAGCAAAAGAAGAGAAGAATGCGGCAAGTCTGAAATCAAAAAAGGGAACAAAGGGTGGAGGTAAAGGTAGGAAGCAATCCAAAAAGAATAAATCAAAGGAAAGTGATGATGACGACAACGATGATGATGAAGCTCGTTTTGCCTTCTGCCATGAAAATGCCGTGGAACAATGGAAGAATGGGTTTTATGATGTTCCTGTAACTAAACTAGCTGTCTATTATTCTGTGTCTTTATATGATAATTAG 990 0.4515 MPELPEVEAARRAVEDNGIGKKIKKAIIADDSKVIDGVSRSEFEASLLGKTIVAARRKGKNMWLELDSSPFPSFQFGFTGGLCAVFRNGNEIKRVVGWIMAWRCPSLTKGGSLEFAFSMIVLFRARIHPRQTASSLSKENCSTLHKSIKEVGFFLQVIEKAVEVGADSSQYPAGWIFHSREKKPGKAIADGKKIDFITAGGRTSAYVPELQKRSGSQDVKVAGKPKKRTSKKNKGEYDDDDNDDDTEEPAKEEKNAASLKSKKGTKGGGKGRKQSKKNKSKESDDDDNDDDEARFAFCHENAVEQWKNGFYDVPVTKLAVYYSVSLYDN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0579 329 MobiDBLite consensus disorder prediction 207 292 - -
Lele44g0579 329 ProSiteProfiles Formamidopyrimidine-DNA glycosylase catalytic domain profile. 2 93 IPR012319 GO:0003906|GO:0006284|GO:0008270|GO:0019104
Lele44g0579 329 Coils Coil 327 329 - -
Lele44g0579 329 PANTHER FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1 82 - -
Lele44g0579 329 SUPERFAMILY N-terminal domain of MutM-like DNA repair proteins 2 85 IPR035937 -
Lele44g0579 329 Pfam Formamidopyrimidine-DNA glycosylase N-terminal domain 1 84 IPR012319 GO:0003906|GO:0006284|GO:0008270|GO:0019104
Lele44g0579 329 SMART Fapy_DNA_glyco_2 2 99 IPR012319 GO:0003906|GO:0006284|GO:0008270|GO:0019104
Lele44g0579 329 Gene3D - 120 222 - -
Lele44g0579 329 SUPERFAMILY S13-like H2TH domain 121 152 IPR010979 GO:0003676
Lele44g0579 329 Gene3D - 1 109 IPR035937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0579 Lele-ChrLele44 4497660 4501900 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0770 41 17578063 17582293 Lele44g0579 44 4497660 4501900 hybridization
Lele42g0763 42 20644050 20657160 Lele44g0579 44 4497660 4501900 hybridization