Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1173 ATGCCTTGTCTCAACATCTCCACCAACGTCAACCTCGACGGTGTTGACACTTCTTCCGTTCTCTCTGAAGCTACCTCCACCGTCGCCAAGCTCATCGGCAAACCTGAGTCCTATGTAATGATTGTGCTGAAAGGATCAATTCCCATATCTTTTGGTGGGACTGAGCAGCCTGCAGCCTATGGTGAATTGGTGTCCATTGGTGGTCTTAACCCTGATGTGAACAAGAAACTTAGTGCTGCAATTGCATCAATTCTCGAAACCAAGTTATCTGTGCCCAAATCGCGATTCTTCCTAAAATTCTATGATACAAAGGAGCATCAAAGTCAAGAATATGCACAGTGTTTGCATGCTTTACACCAGCACTAG 366 0.4536 MPCLNISTNVNLDGVDTSSVLSEATSTVAKLIGKPESYVMIVLKGSIPISFGGTEQPAAYGELVSIGGLNPDVNKKLSAAIASILETKLSVPKSRFFLKFYDTKEHQSQEYAQCLHALHQH 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1173 121 Pfam Macrophage migration inhibitory factor (MIF) 2 105 IPR001398 -
Lele43g1173 121 SUPERFAMILY Tautomerase/MIF 1 106 IPR014347 -
Lele43g1173 121 Gene3D Macrophage Migration Inhibitory Factor 2 109 IPR014347 -
Lele43g1173 121 PANTHER D-DOPACHROME DECARBOXYLASE 1 108 IPR001398 -
Lele43g1173 121 FunFam Tautomerase/MIF superfamily protein 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1173 Lele-ChrLele43 20069732 20071239 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1173 43 20069732 20071239 Lele37g1371 37 22558166 22559120 CCT
Lele43g1173 43 20069732 20071239 Lele38g1247 38 23320447 23321543 CCT
Lele43g1173 43 20069732 20071239 Lele39g0051 39 370480 371410 CCT
Lele43g1173 43 20069732 20071239 Lele40g1190 40 21821608 21822702 CCT
Lele43g1173 43 20069732 20071239 Lele43g1173 43 20069732 20071239 ECH
Lele41g0187 41 1530865 1532438 Lele43g1173 43 20069732 20071239 hybridization