Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1247 ATGGATCAAGTGGCCAACGCTGTCGGAACATACTGGTTTAAAGACAAGGCCACCAAGGAACTCGCTTCTGTCGGCAATGATATCAATTCACTGACAAACAGTATTGAAGGAGGAACAAAATGGCTGGTCAACAAAGTAAAAGGAAAGATGCAAAAGCCATTAGCAGAGTTGCTAAAGGAGAATGATCTGCCCATAGGAATGTTTCCAAGAGACGCGACAAACTATGAATATAATGAACAGACAAAGAAGCTAGTGGTTAACATGGGAGAGGTGTGTGAGGTGGGATACAAGGATTCATCAGTACTGCGTTTTGATAAAACTGTGAGTGGTGTTCTGGACACAGGGAGGTTGACAGAGATAGAAGGAATGAAGACAAAGATTACGTTGATTTGGATCAAAGTAACCAACATTGCTTCTGAGGGCACTTCCAAGCTTCATATCACTGCCGGTTTGAAGAAAAGTAGGAGTAGGGAAGCTTACGAAGTTTCTAGAGATGGCGTTGTTGTAGACAAATTCTAA 519 0.422 MDQVANAVGTYWFKDKATKELASVGNDINSLTNSIEGGTKWLVNKVKGKMQKPLAELLKENDLPIGMFPRDATNYEYNEQTKKLVVNMGEVCEVGYKDSSVLRFDKTVSGVLDTGRLTEIEGMKTKITLIWIKVTNIASEGTSKLHITAGLKKSRSREAYEVSRDGVVVDKF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1247 172 PANTHER T31J12.3 PROTEIN-RELATED 51 164 IPR007493 -
Lele38g1247 172 Gene3D - 32 172 IPR036758 -
Lele38g1247 172 Pfam Protein of unknown function, DUF538 55 161 IPR007493 -
Lele38g1247 172 SUPERFAMILY At5g01610-like 3 171 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1247 Lele-ChrLele38 23320447 23321543 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1173 43 20069732 20071239 Lele38g1247 38 23320447 23321543 CCT
Lele41g0186 41 1524832 1527136 Lele38g1247 38 23320447 23321543 CCT
Lele38g1247 38 23320447 23321543 Lele39g0051 39 370480 371410 hybridization
Lele38g1247 38 23320447 23321543 Lele40g1190 40 21821608 21822702 hybridization