Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1190 ATGGATCAAGTGGCCAACGCTGTCGGAACATACTGGTTTAAAGACAAGGCCACCAAGGAACTCGCTTCTGTCGGCAATGATATCAATTCACTGACAAACAGTATAGAAGGAGGAACAAAATGGTTGGTCAACAAACCATTAGCAGAGTTGCTAAAGGAGAATGATCTGCCCGTAGGAATGTTTCCAAGAGACGCGACAAACTATGAATATAATGAACAGACAAAGAAGCTTGTGGTTAACATGGGAGAGGTGTGTGAGGTGGGATACAAGGATTCATCGGTACTGCGTTTTGATAAAACTGTGAGTGGTGTTCTGGACACAGGGAGGTTGACAGAGATAGAAGGAATGAAGACGAAGATTACGTTGATTTGGATCAAAGTCACCAACATTGCTTCTGAGGGCCCTTCCAAGCTTCATATCACTGCCGGTTTGAAGAAAAGTAGGAGTAGGGAAGCTTACGAAGTTTCTAGAGATGGCGTTGTTGTAGACAAATTCTAA 498 0.4337 MDQVANAVGTYWFKDKATKELASVGNDINSLTNSIEGGTKWLVNKPLAELLKENDLPVGMFPRDATNYEYNEQTKKLVVNMGEVCEVGYKDSSVLRFDKTVSGVLDTGRLTEIEGMKTKITLIWIKVTNIASEGPSKLHITAGLKKSRSREAYEVSRDGVVVDKF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1190 165 PANTHER T31J12.3 PROTEIN-RELATED 44 157 IPR007493 -
Lele40g1190 165 SUPERFAMILY At5g01610-like 3 164 IPR036758 -
Lele40g1190 165 Pfam Protein of unknown function, DUF538 48 154 IPR007493 -
Lele40g1190 165 Gene3D - 32 165 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1190 Lele-ChrLele40 21821608 21822702 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1173 43 20069732 20071239 Lele40g1190 40 21821608 21822702 CCT
Lele41g0186 41 1524832 1527136 Lele40g1190 40 21821608 21822702 CCT
Lele37g1371 37 22558166 22559120 Lele40g1190 40 21821608 21822702 hybridization
Lele38g1247 38 23320447 23321543 Lele40g1190 40 21821608 21822702 hybridization