Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0053 ATGCCAATTTTACAATCTAAGACAAGGACACCATCTCCCACAAGCAACTTCTTTGCCTATATAAACCCTCCTCTGCTTCTCTTCTTCCTCCCCCCTCCTGCCTCTTCCTTCCTTCCTTCCTTCATTACCATTCTTATCACTCTCTCCAAGCTTTTTGCTTCTCACTCTCAATCCATCCATCAATCAAAAACAAATCTTTCTTCTCTTTCTGGTTGTCTTCTGTCTGAAATGGAGTACGATGATCTCTTTAGACAGGCCCAGAGACCAAAATACGATTGCCTTCTTTTCGATTTAGATGATACTCTGTATCCTCTCAGTACTGGTCTTGCAAAAGCTTGCGGGCAGAACATCAAAGATTACATGGTTGAGAAGCTTGGCATAGACAGGAGCAAGATTGATGACTTGTCCACTCTTCTGTACAGAAACTATGGAACAACCATGTCTGGTCTTAGGGCAATTGGATATGACTTCGACTATGATGAATATCATAGTTTTGTCCATGGGAGATTGCCTTATGAGAACCTGAAACCAGACCCTGTTCTGAGGAACCTTTTGCTGAGCCTGCCATATAGGAAACTGATATTCACAAATGCAGACAAGGTTCATGCAGTGAAGGCACTGAGCAGACTTGGATTAGAGGATTGCTTTGAAGGGATTATATGTTTTGAGACTCTTAATCCCATCCACAAGAACAATGTTACAGAAGATGAAGAAGATGAATTTGAGACCAACACAAGTCCTACCACAAGCAACAGCAATAATGGATCTGAAATCTTTGACATTATAGGACATTTTGCTCAACCCAATGCTGACACCTCAGTGTTGCCTAAGACACCAATCGTCTGCAAACCATTAGAACATGCCATTGAATTGGCCCTCAAGATTGCAAACCTTAACCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATTCAAGCTGGCAAGCGTCTGGGCCTTGACACTGTACAGGTTGGTGCATCTCAGAGAGCAAAAGGAGCAGATTATGCTTTAGAAAGCATTCATAACCTTAGAGAAGCAGTGCCTGAGCTATGGGAAGCTGATATCAAATCAGAAGTTGCATACCCTGGAAAGCTTGCTGTGGAGACTTCTGTTACTGCCTAA 1128 0.4255 MPILQSKTRTPSPTSNFFAYINPPLLLFFLPPPASSFLPSFITILITLSKLFASHSQSIHQSKTNLSSLSGCLLSEMEYDDLFRQAQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMVEKLGIDRSKIDDLSTLLYRNYGTTMSGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPIHKNNVTEDEEDEFETNTSPTTSNSNNGSEIFDIIGHFAQPNADTSVLPKTPIVCKPLEHAIELALKIANLNPQRTLFFEDSVRNIQAGKRLGLDTVQVGASQRAKGADYALESIHNLREAVPELWEADIKSEVAYPGKLAVETSVTA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0053 375 MobiDBLite consensus disorder prediction 233 253 - -
Lele42g0053 375 Gene3D - 157 353 IPR023214 -
Lele42g0053 375 SFLD C1.5.3: 5'-Nucleotidase Like 86 354 IPR010237 -
Lele42g0053 375 SFLD Haloacid Dehalogenase 86 354 - -
Lele42g0053 375 SUPERFAMILY HAD-like 90 353 IPR036412 -
Lele42g0053 375 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 85 374 - -
Lele42g0053 375 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 279 326 IPR006439 -
Lele42g0053 375 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 92 325 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0053 Lele-ChrLele42 394884 397257 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0246 39 1643796 1647246 Lele42g0053 42 394884 397257 CCT
Lele42g0053 42 394884 397257 Lele42g0053 42 394884 397257 ECH
Lele42g0053 42 394884 397257 Lele43g1308 43 21218091 21220427 hybridization
Lele42g0053 42 394884 397257 Lele44g1300 44 21280046 21281804 hybridization