Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0843 ATGGCAACCAGGAGAGTAGTTAAAGTTCGTCGCCAGCAGAGCAATTCTGCTCCATCTACAAATCCTTTTGCTGGAGTACGTTTGGTTTCTCCTCCTGAGTCGAGTGCTAAACCTGCGGAAGCTACCCCTGTAGCACAAACAACTAGTGAGAACACTGTTGCAGCTGATACAAAATGTACTGATGATGTAACCAATGATTCTGAGAAAGCTAAAGATGGGGATGGCAAACAAGTAGAGAGCAAAGCTGATGAGTTGGGAAATAAATCTGCTGAAGTTAAGGATGCTGTTGATGGAGAGAAAACTGCAGAGGAGAGCACGGGTGAAAAATCTGAGGTAGGCAAACAACAAAGAGAGGATCATGATGGAAATGAGGATAAGAAGGAAGCTGAAGATAAGGAGACTGCTGGCGGGGGTTATAAAGAACAAACTAATAAAATTGATAATGAGGATAAGGAAGATGCAGAAGCTAAAAAGAGTGCTGGTGAGGTGGATAAAGAACAAACTAGTAAAAGTGATAATGAGGATAAGAAGGATGCTGAAGATAAAGAGCATGCTGGTGAGGTGGAAAAGGAACAAACTAAGGATGACAATGATACAGTAAATGATGATCAGAAAGGGAACGCGGGTGAAAGTCAAGAGCCTAGTTCAGAAGGATCTTCTTTGAAGTCATTTCAACAGCTTTCAAGCAGCCAAAATGCATTTAGTGGTCTTGCTGGAACTGGATTTTCTGCTTCCTCATTTACCTTTGGGTCTTTATCAAATGAAGGGTCTGCTTTGGGCTGTGGTTCTGGATCAATTTTTGGAATGAAAAATGATAAGCCTTTTGGCCTGGGTTTATCGAACAATGGAACTTCTGTTTTTGGGGCAACTGGTGCCTCCACTGCTGCTAAAGGTGAGGGAAGTGGTTTCCCAACGATGCAGGAGGTCGTAGTTAAGACGGGCGAGGAAAACGAGAAAGTGGTTTTCAATGCAGATTCAATATTATTCGAGTTTGTTGAGGGAAGTTGGAAGGAACGAGGGAAGGGTGAACTGAAGGTCAATGTTTCTACTGGAGGAAACGAAAAGGCCAGACTTCTTATGAGGACGAGGGGAAATTACAGGCTGATATTAAATGCACGTCTGTTCCCTGATATAAAGTTCACCAATATGGAGAAGAAAGGTATTACTTTTGCCTGCATCAATAGTGCCAATGAAGGGAAGGATGGCCTCTCAACATTCGCCTTGAAATTCAAAGATGGGTCGATAGTAGAGGAATTTAAAGCGGCAGTCGTGGCGGTCGTGGCTCATAAGGGCGAGAAAGCAGCGACAGTTCTCAATACCCCAGAAAACTCCCCCAAGGCTTCAGATGGTTAA 1353 0.4346 MATRRVVKVRRQQSNSAPSTNPFAGVRLVSPPESSAKPAEATPVAQTTSENTVAADTKCTDDVTNDSEKAKDGDGKQVESKADELGNKSAEVKDAVDGEKTAEESTGEKSEVGKQQREDHDGNEDKKEAEDKETAGGGYKEQTNKIDNEDKEDAEAKKSAGEVDKEQTSKSDNEDKKDAEDKEHAGEVEKEQTKDDNDTVNDDQKGNAGESQEPSSEGSSLKSFQQLSSSQNAFSGLAGTGFSASSFTFGSLSNEGSALGCGSGSIFGMKNDKPFGLGLSNNGTSVFGATGASTAAKGEGSGFPTMQEVVVKTGEENEKVVFNADSILFEFVEGSWKERGKGELKVNVSTGGNEKARLLMRTRGNYRLILNARLFPDIKFTNMEKKGITFACINSANEGKDGLSTFALKFKDGSIVEEFKAAVVAVVAHKGEKAATVLNTPENSPKASDG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0843 450 MobiDBLite consensus disorder prediction 204 227 - -
Lele41g0843 450 CDD RanBD_NUP50_plant 313 419 IPR045207 -
Lele41g0843 450 MobiDBLite consensus disorder prediction 8 23 - -
Lele41g0843 450 MobiDBLite consensus disorder prediction 40 60 - -
Lele41g0843 450 MobiDBLite consensus disorder prediction 1 227 - -
Lele41g0843 450 SUPERFAMILY PH domain-like 304 425 - -
Lele41g0843 450 SMART ranbd_3 303 426 IPR000156 GO:0046907
Lele41g0843 450 ProSiteProfiles Ran binding domain type 1 profile. 304 423 IPR000156 GO:0046907
Lele41g0843 450 Pfam RanBP1 domain 311 424 IPR000156 GO:0046907
Lele41g0843 450 PANTHER RAN BINDING PROTEIN 1 434 IPR045255 -
Lele41g0843 450 Gene3D - 241 427 IPR011993 -
Lele41g0843 450 MobiDBLite consensus disorder prediction 61 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0843 Lele-ChrLele41 18138221 18139573 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0843 41 18138221 18139573 Lele43g0549 43 4959059 4960552 hybridization
Lele41g0843 41 18138221 18139573 Lele44g0512 44 3946590 3948068 hybridization