Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0052 ATGAAATGGACCCCATCTCCCAGAAGCAACTTTGCCTATATAAACCCTCCCCTGCTTCCCTTGTTCTCCCCCCTCCTGCCTCTTCCTTCCTCCATTACCATTCATATCACTCTCCCCAATCTTTTTGCTTCTCACTCTCAATCAATCCATCAATCAAACCAAATCACTCTTTCTTCTCTTTCTGGTTCTCTTCTGTCTGAAATGGAGTACGAGGATCGCTTCAGACAGGCTCAGAGACCAAAATACGATTGCCTTCTTTTCGATTTAGATGATACTCTGTATCCTCTCAGTACTGGTCTTGCAAAAGCTTGCGGACAGAACATCAAAGATTACATGGTTGAGAAGATTGGCATACACAGAAACAAGATTGATGACTTGTCCAACCTTCTGTACAGGAACTATGGAACAACCATGGCTGGTCTTAGGGCTATTGGATATGACTTTGACTATGATGAATATCACAGTTTTGTCCATGGGAGATTGCCTTATGAGAACCTGAAACCAGACCCTGTTCTGAGGAACCTTTTGCTGAGCCTGCCATATAGGAAACTGATATTCACAAATGCAGACAAGGTGCATGCAATGAAGGCACTGAGCAGACTTGGATTAGAGGATTGCTTTGAAGGGATTATATGTTTTGAGACTCTTAATCCCATCCACAAGAACAATGTTTCAGAAGATGAATTTGAGACCAACACAAATCCTACCACAAGTAATGGATTTGAAATCTTTGACATTATTGGACATTTTGCTCAACCCAATGCTGACACCTCAGTGTTGCCTAAGACACCAATCATCTCCAAACCATCAGAACATGCCATTGAATTGGCTCTCAAGATTGCAAACCTTAACCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATTCAAGCTGGGAAGCGTCTGGGCCTTGACACTGTACAGGTTGGTGCATCTCAGAGAGCAAAAGGAGCAGATTATGGGTTAGAAAGCATTCATAACCTTAGAGAGGCAGTGCCTGAGCTATGGGAGGCTGATATCAAATCAGAAGTTGCATACCCTGGAAAGCTTGCTGTGGAGACTTCTGTTACTGCCTAA 1083 0.4312 MKWTPSPRSNFAYINPPLLPLFSPLLPLPSSITIHITLPNLFASHSQSIHQSNQITLSSLSGSLLSEMEYEDRFRQAQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMVEKIGIHRNKIDDLSNLLYRNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAMKALSRLGLEDCFEGIICFETLNPIHKNNVSEDEFETNTNPTTSNGFEIFDIIGHFAQPNADTSVLPKTPIISKPSEHAIELALKIANLNPQRTLFFEDSVRNIQAGKRLGLDTVQVGASQRAKGADYGLESIHNLREAVPELWEADIKSEVAYPGKLAVETSVTA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0052 360 Gene3D - 148 338 IPR023214 -
Lele41g0052 360 SUPERFAMILY HAD-like 80 338 IPR036412 -
Lele41g0052 360 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 83 310 IPR010237 -
Lele41g0052 360 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 74 359 - -
Lele41g0052 360 Pfam Haloacid dehalogenase-like hydrolase 266 311 IPR041492 -
Lele41g0052 360 SFLD C1.5.3: 5'-Nucleotidase Like 77 339 IPR010237 -
Lele41g0052 360 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 267 311 IPR006439 -
Lele41g0052 360 SFLD Haloacid Dehalogenase 77 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0052 Lele-ChrLele41 373741 376281 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0246 39 1643796 1647246 Lele41g0052 41 373741 376281 CCT
Lele41g0052 41 373741 376281 Lele41g0052 41 373741 376281 ECH
Lele41g0052 41 373741 376281 Lele43g1308 43 21218091 21220427 hybridization
Lele41g0052 41 373741 376281 Lele44g1300 44 21280046 21281804 hybridization