Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g1124 ATGGGTGCTAAAAAAATTTCTCAGAAACTCCTTGATTATCGGCTTAAAAGCCGCACGACCAAGTCCCCTGTTTTCTATATCCTTTCATTTATTCTCATATTCTTCTTCGTCTATGCAGAGAATATTTTCTCAAGTTCTTCAATCCTGCAGACCATGAATTTCACTGCTCAACAATCCGCAGACGAACTCAGGTTACCTCAACCTGATGAACTCACTGATCAGTCATCAATTCTCGACAGTGTTGATGCTTTCCAGCTTTCTCCTCAAGAAAATGAAGAGATAGAGACTTCTCAGCAATCTGCAGATGAAATAACCTCACCTCAATCTGATGACCCATCTGAGAAAGAAAATGGTGAAGACCAAGAGACAGAGGCTGTAGAAGAAGATGAAGATGATCCTCTTATCCCCCCAGAAAATGTATCTAGGGAAGAGAGAATGACCTGGTTCAGAAGACAACTTCCAGAACTGAAGATTCTTCAATCAAACAGCTTATCACAGCAGTTTCATGGCAGGGTCATGAGTTTCCTCAACAATGACTGCTCATTGCTGTTTCACATCATATGGCTTTCACCAACACGGTCCTTTAGCAAGAGAGATTTTCTCACCATGGATACAATCTTTCAGGTCCATCCTCAAGCATGTCTGCTAATAGTATCAAGAACAATGGACTCCAAAAGAGGTGATAAAATTCTGAAACCACTCGTGGATCGAGGATTCAAAGTTCTTGCGGTCACACCGGATTTGCCTTTCATGCTCAAGGACACACCAGCTGAAGCATGGCTTCAAGAGATGAACAGTGGAAACAAAGATCCAGGACACATCCCATTGTCCCAGAATCTTGCAAACCTCATAAGACTAGCATTCTTGTACAAATATGGAGGGGTTTATATGGACACAGACATCATAGTACTAAAGGATTTTTCAGGTTTAAGGAATGTGATTGGAGCACAGAGTGTGGACTCAAACACTAAGAAATGGAACAGATTGAATGGCGCAATTATGATATTTGACATGAACCATCCAATTCTGTTGGAATTCTTGCAGGAATTTGCTGCAACTTTTGATGGGAATAAGTGGGGACATAATGGGCCTTATTTGGTGTCAAGAGTTATAGAGAGATTGGGAAACATACCAGCATATAATCTCACAATTTTGCCTCCAAGAGCATTCTATGCAGTGAATTGGTATAAAATTGGGAGGCTTTTCAATAAGCCCGAGAATGAGACAGAATCAAGATGGGTTGAGAACAAGATCAAAGAGCTGTATGAGGGAGAGACTTATGCAATACACCTTTGGAACAAGAGAAGCAGAGAATTAGAGATTCAAGAGGCAAGTGTGATGGCTAGAATCATCTCTCAACACTGTGTCGTTTGCGCCGGGGCATAA 1386 0.4134 MGAKKISQKLLDYRLKSRTTKSPVFYILSFILIFFFVYAENIFSSSSILQTMNFTAQQSADELRLPQPDELTDQSSILDSVDAFQLSPQENEEIETSQQSADEITSPQSDDPSEKENGEDQETEAVEEDEDDPLIPPENVSREERMTWFRRQLPELKILQSNSLSQQFHGRVMSFLNNDCSLLFHIIWLSPTRSFSKRDFLTMDTIFQVHPQACLLIVSRTMDSKRGDKILKPLVDRGFKVLAVTPDLPFMLKDTPAEAWLQEMNSGNKDPGHIPLSQNLANLIRLAFLYKYGGVYMDTDIIVLKDFSGLRNVIGAQSVDSNTKKWNRLNGAIMIFDMNHPILLEFLQEFAATFDGNKWGHNGPYLVSRVIERLGNIPAYNLTILPPRAFYAVNWYKIGRLFNKPENETESRWVENKIKELYEGETYAIHLWNKRSRELEIQEASVMARIISQHCVVCAGA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g1124 461 MobiDBLite consensus disorder prediction 115 134 - -
Lele40g1124 461 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 16 459 IPR044789 -
Lele40g1124 461 MobiDBLite consensus disorder prediction 88 143 - -
Lele40g1124 461 MobiDBLite consensus disorder prediction 88 107 - -
Lele40g1124 461 Gene3D - 177 385 - -
Lele40g1124 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 178 448 IPR029044 -
Lele40g1124 461 Pfam Alpha 1,4-glycosyltransferase conserved region 336 459 IPR007652 -
Lele40g1124 461 Pfam Glycosyltransferase sugar-binding region containing DXD motif 198 318 IPR007577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g1124 Lele-ChrLele40 21380743 21382416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g1124 127 459 Glycosyltransferase AT2G38150 57.784 1.36e-148 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1282 37 22015818 22020055 Lele40g1124 40 21380743 21382416 hybridization
Lele38g1183 38 22886529 22888191 Lele40g1124 40 21380743 21382416 hybridization