Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1183 ATGGGTGCTAAAAAAATTTCTCAGAAACTCCTTGATTATCGGGTTAAAAGCCGCACCACCAAGTCCCCTCTTTTCTATATCTTTTCATTTATTCTCATATTCTTCTTCGTCTATGCAGAGAATATTTTCTCAAGTTCTTCAATCCTGCAGACCATTAATTTCACTACTCAACAATCCGCAGATGAACTCAGGTTACCTCAACCTGATGAACTCACTGATCAGTCATCAATTCTCGACAGTGTTGATGCTTTCCAGCTTTCTCCTCAAGAAAATGAAGAGATAGAGACTTCTCAGCAATCTGCAGATGAAATAACCTCACCTCAATCTGATGAACCATCTGAGAAAGAAAATGGTGAAGACCAAGAGACAGAGGCTGAAGAAGAAGATGAAGAAGATGAAGATGATCCCCTTATCCCCCCAGAAAATGTATCCAGGGAAGAGAGAATGACCTGGTTCAGAAGACAACTTCCAGAACTGAAGATTCTTCAATCAAACAGCTTATCACAGCAGTTTCATGGCAGGGTCATGAGTTTCCTCAACAATGGCTGCTCATTGCTGTTTCACATCATATGGCTTTCACCAACACGGTCCTTTAGCAAGAGAGATTTTCTCACCATGGATACAATCTTTCAGGTCCATCCTCAAGCGTGTCTGCTAATAGTATCAAGAACATTGGACTCCAAACGAGGGGATAAAATTCTGAAACCACTCGTGGATCGAGGATTCAAAGTTCTTGCGGTCACACCGGATTTGCCTTTCATGCTCAAGGACACACCAGCTGAAGCATGGCTTCTAGAGATGAACAGTGGAAACAAAGATCCAGGACACATCCCATTGTCCCAGAATCTTGCAAACCTCATAAGACTAGCATTCTTGTACAAATATGGAGGTGTTTATATGGACACAGACATCATAGTACTAAAGGATTTTTCAGGTTTAAGGAATGTGATTGGAGCACAGAGTGTGGACTCAAACACTAAGAAATGGAACAGATTGAATGGTGCAATTATGATATTTGACATGAACCATCCAATTCTGTTGGAATTCTTGCAGGAATTTGCTGCAACTTTTGATGGGAATAAGTGGGGACATAATGGCCCTTATTTGGTGTCAAGAGTTATAGAGAGATTGGGAAACATACCAGCATTTAATCTCACAATTTTGCCTCCAAAAGCATTCTATGCTGTGAATTGGTATAAAATTGGGAGGCTTTTCAATAAGCCAGAGAATGAGACAGAATCAAGATGGGTTGAGAACAAGATCAAAGAGCTGTATGAGGGAGAGACTTATGCAATACACCTTTGGAACAAGAGAAGCAGAGAATTAGAGATTCAAGAGGCAAGTGTGATGGCTAGAATCATCTCTCAACACTGTGTCGTTTGCGCCGGGTCATAA 1395 0.41 MGAKKISQKLLDYRVKSRTTKSPLFYIFSFILIFFFVYAENIFSSSSILQTINFTTQQSADELRLPQPDELTDQSSILDSVDAFQLSPQENEEIETSQQSADEITSPQSDEPSEKENGEDQETEAEEEDEEDEDDPLIPPENVSREERMTWFRRQLPELKILQSNSLSQQFHGRVMSFLNNGCSLLFHIIWLSPTRSFSKRDFLTMDTIFQVHPQACLLIVSRTLDSKRGDKILKPLVDRGFKVLAVTPDLPFMLKDTPAEAWLLEMNSGNKDPGHIPLSQNLANLIRLAFLYKYGGVYMDTDIIVLKDFSGLRNVIGAQSVDSNTKKWNRLNGAIMIFDMNHPILLEFLQEFAATFDGNKWGHNGPYLVSRVIERLGNIPAFNLTILPPKAFYAVNWYKIGRLFNKPENETESRWVENKIKELYEGETYAIHLWNKRSRELEIQEASVMARIISQHCVVCAGS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1183 464 Pfam Alpha 1,4-glycosyltransferase conserved region 339 462 IPR007652 -
Lele38g1183 464 MobiDBLite consensus disorder prediction 88 107 - -
Lele38g1183 464 Pfam Glycosyltransferase sugar-binding region containing DXD motif 201 321 IPR007577 -
Lele38g1183 464 SUPERFAMILY Nucleotide-diphospho-sugar transferases 180 451 IPR029044 -
Lele38g1183 464 MobiDBLite consensus disorder prediction 115 137 - -
Lele38g1183 464 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 16 462 IPR044789 -
Lele38g1183 464 MobiDBLite consensus disorder prediction 88 146 - -
Lele38g1183 464 Gene3D - 183 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1183 Lele-ChrLele38 22886529 22888191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1183 125 462 Glycosyltransferase AT2G38150 57.227 1.94e-148 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1183 38 22886529 22888191 Lele39g0127 39 830345 831418 hybridization
Lele38g1183 38 22886529 22888191 Lele40g1124 40 21380743 21382416 hybridization