Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1282 ATGGACGAGAACGAACACAATAAATGCATGTACACCATTAATTTCACCGCTCAACAATCCGCAGATGAACTAAGCTTATCTCAATCTGATGAACCATCTGAGAAAGAAAATGGTGAAGACCAAGAGATAGAGGCTGAAGAAGAAGATGATCCTCTTTTCCCCCCAGAAAATGTATCCAGGGAAGAGAGAATGACCTGGTTCAGAAGACAACTTCCAGAACTGAAGATTCTTCAATCAAACAGTTTATCACAGCAGTTTCATGGCAGAGTCATGAGTTTCCTCAGCAATGGCTGCTCATTGCTGTTTCACATCATATGGCTTTCACCAACACGGTCCTTTGGCAAGAGAGATTTTCTCACCATGGATACAATCTTTCAGGTCCATCCTCAAGCATGTCTGCTAATAGTATCAAGAACAATGGATTCTAAACGAGGGGATAAAACTCTGAAACCCCTGGTGGATCGAGGATTCAAAGTTCTCGCTGTCACACCGGATTTGCCTTTCATGCTCAAGTACACACCAGCTGAAGCATGGCTGCAAGAGATGAACAGTGGAAACAAAGATCCAGGACACATCCCATTGTCCCAGAATCTTGCAAACCTCATAAGACTAGCATTCTTGTACAAATATGGAGGTGTTTATATGGACACAGGCATCATAGCACTAAGGGACTTTTACGGTTTGAGGAATGTGATTGGAGCACAAAGTGTGGACTCAATAACTAAGAAATGGAACAGATTGAATGGTGCAATTATTATATTTGACATGAACCATCCAATTCTGTTGGAATTCTTGCTGGAATTTGCTTCAACTTTTGATGGGAATAAGTGGGGACACAATGGGCCTTACTTGGTTTCAAGAGTTACAGAGAGATTAGGGAACATATCAGCATATAATCTCACAATTTTGCCTCCAAAAGCATTCTATGCTGTGAACTGGACACTCCCGCTGAATCATGGCTCGAAGAGTTCAAAAGCGGGGAAAGAGACCTTGGAAATATCCCCTTGTCTCAGAATCTGTCCAATCTCATACGAGTGTGGATTCAGAAACGCAGTAGGAGCCCAGAGTGTGGATTCTGCAACTAGAAAATGGACAAGACTTAATGGTGGAGTGATGATATTTGACATTCACCATCCAATTCTAATAGATTTTATGCAAGAATTTGCAAGAACTTTTAATGGGAATCGATGGGGTTATAATGGGCCTTACTTGGTTTCCAGAGTTGTACAGAGAGTTAGAAGCACCCCAGAATACAACCTCGTGATTTTGCCTCCAAAAGCCTTTTTTCCTGTAGATTGGGTTAAAATTGTGAGGCTGCTCGAGAAGCCAGAAAATGAAACAGAATCAAAATGGATAGAAAATAGGTTTATGGAATTACTATATGATGGGGAGACTTACACAATTCACATGTGGAACAGGATTAGCAAAGTGACTGAGATAGAAGAGGGAAGTGTCATTGCAAGATTAGCCTCCGCGCGATGTGTTATCTGTGTCAATATCACAAACAGTTGA 1512 0.414 MDENEHNKCMYTINFTAQQSADELSLSQSDEPSEKENGEDQEIEAEEEDDPLFPPENVSREERMTWFRRQLPELKILQSNSLSQQFHGRVMSFLSNGCSLLFHIIWLSPTRSFGKRDFLTMDTIFQVHPQACLLIVSRTMDSKRGDKTLKPLVDRGFKVLAVTPDLPFMLKYTPAEAWLQEMNSGNKDPGHIPLSQNLANLIRLAFLYKYGGVYMDTGIIALRDFYGLRNVIGAQSVDSITKKWNRLNGAIIIFDMNHPILLEFLLEFASTFDGNKWGHNGPYLVSRVTERLGNISAYNLTILPPKAFYAVNWTLPLNHGSKSSKAGKETLEISPCLRICPISYECGFRNAVGAQSVDSATRKWTRLNGGVMIFDIHHPILIDFMQEFARTFNGNRWGYNGPYLVSRVVQRVRSTPEYNLVILPPKAFFPVDWVKIVRLLEKPENETESKWIENRFMELLYDGETYTIHMWNRISKVTEIEEGSVIARLASARCVICVNITNS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1282 503 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 501 IPR029044 -
Lele37g1282 503 MobiDBLite consensus disorder prediction 20 57 - -
Lele37g1282 503 Gene3D - 100 308 - -
Lele37g1282 503 MobiDBLite consensus disorder prediction 35 52 - -
Lele37g1282 503 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 19 314 IPR044789 -
Lele37g1282 503 SUPERFAMILY Nucleotide-diphospho-sugar transferases 140 316 IPR029044 -
Lele37g1282 503 Pfam Alpha 1,4-glycosyltransferase conserved region 254 314 IPR007652 -
Lele37g1282 503 Pfam Alpha 1,4-glycosyltransferase conserved region 374 500 IPR007652 -
Lele37g1282 503 Pfam Glycosyltransferase sugar-binding region containing DXD motif 118 236 IPR007577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1282 Lele-ChrLele37 22015818 22020055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g1282 347 503 Glycosyltransferase AT2G38150 52.532 3.21e-57 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1282 37 22015818 22020055 Lele39g0127 39 830345 831418 hybridization
Lele37g1282 37 22015818 22020055 Lele40g1124 40 21380743 21382416 hybridization