Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0784 ATGCTTGGGAAGTTACTCATCAAGCTAATTTCTTCCCTTCTGAGCTCCCTGTGTATCTCAAATAAAACTTCATCCCTGACAATGGAGTCATGGGCCTCGTCAGTTCCCAGAAAAGCCCCTCCTCCTCTTCCATCCTCTGGAAATCTTGTGACTGTTCTCAGTATCGATGGAGGGGGTGTTCGAGGCATCATCCCTGCGGTCATCCTTCGTCATTTGGAGAAAGAGCTTCAGGAATGTGCAAAAGACCCAAATGTAAGGATAGCAGATTACTTTGACGTGGTTGCAGGAACAAGCACAGGAGGAATCATCACTGCCATGCTCACAGCTCCTGATCATCATCACCCAAACAACATGAAACGTCCCATGTTCACTGCTTCAGAAATCGTTGAATTTTACAAAACTAAATCCGCTACGATTTTCCCCCAAGGATTCAGCCAAGGGATGATGAAGATTATTTTTCTCTTGCGATCTATAAAGGAAGCTCTGGACCAATTAATAGATCAAATCATTAACAAATTGCCAAGGACAATGGTACCAATGGCTATTAATAAGGATGACATTTTGAAGGGTGCTGATGATGTGGTTAAAGGTTTGGTGTTGCCAAGATATGATGCAAAACCGTTAAGTCATATTTTGGAAGATGAACTTGGAAACTTGTGTCTTCGTGACACTTTGACTAACGTTGTTATCCCTACTTTCGACATGAAGCAACTTGCTCCTACTATCTTCTCATCCTTCAGGAAATATGAAGTGCCTGCACTGGATGCAAAGCTTTCTGATATATGCTTAGGGACTTCAGCGGCTCCCACATTTTTTCCACCCCATTTCTTTGAGAATGAGAAACATGAGTTCCATTTGATTGATGGCGCCTTATCTGCTAATAATCCAGGTTTGGCAGCTATTAGCGAGTTGACTCTGCAGAAGACGGAAAACCCTAAGTTCTTACCCATGATGAACAATCCAAATGACTATAAAAAATTCTTGATGATATCATTGGGATGTGGAACACAACCAAAGGAACACACATACAATGCTAGAAATTCATTATGGTGGGGCGTACTACAATGGATAGGTCCCTTAATGGAATTTTATCCATGTGGAAGTCAATGCATGGTTGATTATCACCTTGCCACTGTTTTTCGTGGCGCTGGTCAGGCTGAGGATCATTACCTTCGAATTCAGGACGATGGATTAACAAAGGAGATGGCGGAAATGGATAACTCATCAAAGAAAAATTTGAATAATCTTGAAACATATGCCAAGGAGCTCTTAAACAAACCTGTTAAAAGGATGAACACTCAAACTTTTGAATACGAGCCGGTTGCGGATGGAACTACAAATGCTCAAGCTCTGAAATGGATTGCGGAGAAGCTGCACGAAGAAAAACAAAATCGTCTTCAGGGAAACCGCAGCGTCTAA 1419 0.42 MLGKLLIKLISSLLSSLCISNKTSSLTMESWASSVPRKAPPPLPSSGNLVTVLSIDGGGVRGIIPAVILRHLEKELQECAKDPNVRIADYFDVVAGTSTGGIITAMLTAPDHHHPNNMKRPMFTASEIVEFYKTKSATIFPQGFSQGMMKIIFLLRSIKEALDQLIDQIINKLPRTMVPMAINKDDILKGADDVVKGLVLPRYDAKPLSHILEDELGNLCLRDTLTNVVIPTFDMKQLAPTIFSSFRKYEVPALDAKLSDICLGTSAAPTFFPPHFFENEKHEFHLIDGALSANNPGLAAISELTLQKTENPKFLPMMNNPNDYKKFLMISLGCGTQPKEHTYNARNSLWWGVLQWIGPLMEFYPCGSQCMVDYHLATVFRGAGQAEDHYLRIQDDGLTKEMAEMDNSSKKNLNNLETYAKELLNKPVKRMNTQTFEYEPVADGTTNAQALKWIAEKLHEEKQNRLQGNRSV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0784 472 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 53 301 IPR002641 GO:0006629
Lele40g0784 472 Gene3D Cytosolic phospholipase A2 catalytic domain 43 470 - -
Lele40g0784 472 SUPERFAMILY FabD/lysophospholipase-like 49 437 IPR016035 -
Lele40g0784 472 PANTHER XYLOSE ISOMERASE 44 465 - -
Lele40g0784 472 Pfam Patatin-like phospholipase 53 300 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0784 Lele-ChrLele40 18275446 18280858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0784 38 465 Miscellaneous Gene Families AT2G26560 43.052 9.85e-104 313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0905 37 18935933 18943797 Lele40g0784 40 18275446 18280858 hybridization
Lele38g0828 38 20033399 20037864 Lele40g0784 40 18275446 18280858 hybridization