Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0905 ATGCCAACAATAATGGCGTCTTACTCGTTCTTGTGTGTTGTCTCTCTCCTTCTTTCTCTCACTCCAAACTTATCACTCGCCAGTCAGATTCCTAAGCTTCCACCTCCGTCGCATGGAACAATCGTCACCATTCTTAGTATTGATGGCGGTGGTCTTCGAGGCCTCATCCCCGCCGTGGTTCTCCGACGCCTTGAAGCTCATCTTCAGGAAATAGGCAACAATGAGCAGTTAAGGACGGCAGACTTTTTTGATGTAATAGCTGGGACCAGCACTGGTGGACTTATCACTGAAATGCTTACAGCTCCAGACTCAAACAACCGACCTTTGTTCCATGCTTCTCAAATAGTTCAGTTCTACAAAGACGAAGCTGCCAAGATTTTCCCGCCACATACACCGCTAAATCTGTTGAAGCCCAAGTACAGTAATGCTTACTTGCGTCATATTACGCAAAAGATATTGAACCAAACAAGAATGAATGATACTTTGACGAATGTTGTTATCACAGCTTTCGATATCAAGCAACTTTCGCCTACGCTCTTCTCTAATTATAAGTTAGAAGAAGTGCCGCAATTGAATGCGTTGCTCTCAGATATAGCCATGGCGACTTCAGCTGCACCAGCGTATCTCCCACCATACCTCTTTGAGAACGCTGGCCAACAGTTCCATATGATTGACGGTGGTGTTATCGCAACTAATCCGGGTATGGTTGCTTTGAGTGAGGTGACAATTAAGAAGAGGAAAAATCCAGAGATGTTCCCTATGATGAAGAACCCAAATGATTACACAAAAGTATTGTTGCTTTCATTGGGCTGTGGGGAAGCTGCTGTGAAGAATGAGTACAGTGCAGAAGACTCGGATTCATGGGGCGCTTTGAAATATGTTTTCAATTTGAAGACTTCTTCGAGTCCCTTGATAGATTTTATGTTTGATGGAAACATGGACATGTCTGAGTATCACCTTGCTTCTCTTTTCCAAGGCATTCACGCCGAGGACAATTATCTTCGAATTCAGGATAATTCATTAACACCAGAGATGTCTAAAATGGACAACTCCAAACCAGAGAATTTGCAGAATCTTGAAAACTTCGGAGAGAATCTGTTAAGGAGTGTGACTAAAAAGTGGAACGTCAACACTTTTAAGCTTGAGGAAGTTCCCAACAAGGTTACCAATGAAATGAATCTCAAAAGGGTGGCGAAGATTCTGTACGAAGAGAGAAAGAGGCGTTTGCAAGGAATGGCGAACCGGAAGATTCAATCACGAGATACCCTTCACATCGTTGAAGCTTACTCACCAAGAGCTCTCTCTCATACATTCATTCTTACATTGTCTTCCTCAGTGAGAAAATTAATGGCTGCTGAGAACGTTAACCTTCCCCTTCCTTCATATGGAAGTATTGTCACTGTTCTTAGTATTGATGGAGGTGGGGTCCGAGGTATCATTCCTGCTGTAATTCTTCGACGCCTCGAGGCTGAACTTCAGAGAATAGAGAATAATGAACATATGAGAATCGCAGATTACTTTGACGTGATAGCAGGAAGCAGCACTGGCGGACTCATCGCTGCCATGCTCACAGCTCCTAACACACAGAACCGTCCTATGTTCTCTGCTCCTGAAGTTGTTCAGTTCTAA 1629 0.4365 MPTIMASYSFLCVVSLLLSLTPNLSLASQIPKLPPPSHGTIVTILSIDGGGLRGLIPAVVLRRLEAHLQEIGNNEQLRTADFFDVIAGTSTGGLITEMLTAPDSNNRPLFHASQIVQFYKDEAAKIFPPHTPLNLLKPKYSNAYLRHITQKILNQTRMNDTLTNVVITAFDIKQLSPTLFSNYKLEEVPQLNALLSDIAMATSAAPAYLPPYLFENAGQQFHMIDGGVIATNPGMVALSEVTIKKRKNPEMFPMMKNPNDYTKVLLLSLGCGEAAVKNEYSAEDSDSWGALKYVFNLKTSSSPLIDFMFDGNMDMSEYHLASLFQGIHAEDNYLRIQDNSLTPEMSKMDNSKPENLQNLENFGENLLRSVTKKWNVNTFKLEEVPNKVTNEMNLKRVAKILYEERKRRLQGMANRKIQSRDTLHIVEAYSPRALSHTFILTLSSSVRKLMAAENVNLPLPSYGSIVTVLSIDGGGVRGIIPAVILRRLEAELQRIENNEHMRIADYFDVIAGSSTGGLIAAMLTAPNTQNRPMFSAPEVVQF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0905 542 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 469 542 IPR002641 GO:0006629
Lele37g0905 542 FunFam Patatin 35 414 - -
Lele37g0905 542 PANTHER XYLOSE ISOMERASE 29 409 - -
Lele37g0905 542 SUPERFAMILY FabD/lysophospholipase-like 466 541 IPR016035 -
Lele37g0905 542 SUPERFAMILY FabD/lysophospholipase-like 42 378 IPR016035 -
Lele37g0905 542 Pfam Patatin-like phospholipase 45 237 IPR002641 GO:0006629
Lele37g0905 542 Pfam Patatin-like phospholipase 469 526 IPR002641 GO:0006629
Lele37g0905 542 Gene3D Cytosolic phospholipase A2 catalytic domain 36 413 - -
Lele37g0905 542 Gene3D Cytosolic phospholipase A2 catalytic domain 459 542 - -
Lele37g0905 542 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 45 238 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0905 Lele-ChrLele37 18935933 18943797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0905 460 542 Acyl Lipid Metabolism Gene Families AT5G43590 63.855 4.11e-21 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0905 37 18935933 18943797 Lele39g0509 39 4210763 4221956 hybridization
Lele37g0905 37 18935933 18943797 Lele40g0784 40 18275446 18280858 hybridization