Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0828 ATGCTTGGGAAGTTACTCATCAAGCTAATTTCTTCCCTTCTGAGCTCTCTGTGTATCTCAAATAAAACTTCATCCCTGACAATGGAGTCAAGGGCCTCGTCAGTTCCCAGAAAAGCCCCTCGTCTTCCATCCTCTGGAAATCTTGTTACTGTTCTCAGTATTGATGGAGGGGGTGTTCGAGGCATCATCCCTGCCGTCATCCTTCGTCATTTGGAGAAAGAGCTTCAGGAATGTGCAAAAGACCCAAATGTAAGGATAGCAGATTACTTTGACGTGGTTGCAGGAACAAGCACAGGAGGAATCATCACTGCCATGCTCACAGCTCCTGATCATCATCACCCAAACAACATGAAACGTCCCATGTTCACTGCTTCAGAAATCGTTGAATTTTACAAAACTAAGTCCGCTACGATTTTCCCCCAAGGATTCTGCCAAGGGAAAATGGTACCAATGGTTATTAATAAGAATGACATTTTGAAGCGTGTTGATGATGATGGGGTTAAAGGTTTGGTGTTGCCAAGATATGATGCAAAACCGTTAAGTCATATTTTGGAAGATGAACTTGGAAACTTGTGTCTTCGTGACACTTTGACTAACATTGTTATCCCTACTTTCGACATGAAGCAACTTGCTCCTACTATCTTCTCATCCTTCAGGAAACAAGAAGTGCCTGCACTGGATGCAAAGCTTTCTGATATATGCTTAGGGACTTCAGCGGCTCCCACATTTTTTCCACCCCATTTCTTTGAGAATGAGAAACATGAGTTCCATTTGATTGATGGTGCCTTATCTGCTAATAATCCAGGTTTGGCAGCTATTAGCGAGTTGACTCTGCAGAAGACGGAAAACCCTAAGTTCTTGCCCATGATGAACAATCCAAATGACTATAAAAAATTCTTGATGATATCACTGGGATGTGGAACACAACCAAAGGAACACACATACGATGCTCGAAATTCATTATGGTGGGGCGTACTACATTGGATAGGTCCCTTAATCGAATTTTATCCGTGTGGAAGTCAATGCATGGTTGATTATCAACTTGCCACTGTTTTTCGTGGCGCTGGTCAGGCTGAGGACCATTACCTTCGAATTCAGGACGATGGATTAACAAAGGAGATGGCCCAAATGGATAACTCATCAAAGAAAAATTTGAAGAATCTTGAAAAATATGCTGAGGAGCTCTTAAACAAACCTGTTAAAAGGATCAACACTCAAACTTTTGAATACGAGCCGGTTCCTGATGGAACTACAAATGCTCAAGCTCTGAAATGGTACGACGAATCTGAATAA 1293 0.4207 MLGKLLIKLISSLLSSLCISNKTSSLTMESRASSVPRKAPRLPSSGNLVTVLSIDGGGVRGIIPAVILRHLEKELQECAKDPNVRIADYFDVVAGTSTGGIITAMLTAPDHHHPNNMKRPMFTASEIVEFYKTKSATIFPQGFCQGKMVPMVINKNDILKRVDDDGVKGLVLPRYDAKPLSHILEDELGNLCLRDTLTNIVIPTFDMKQLAPTIFSSFRKQEVPALDAKLSDICLGTSAAPTFFPPHFFENEKHEFHLIDGALSANNPGLAAISELTLQKTENPKFLPMMNNPNDYKKFLMISLGCGTQPKEHTYDARNSLWWGVLHWIGPLIEFYPCGSQCMVDYQLATVFRGAGQAEDHYLRIQDDGLTKEMAQMDNSSKKNLKNLEKYAEELLNKPVKRINTQTFEYEPVPDGTTNAQALKWYDESE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0828 430 PANTHER XYLOSE ISOMERASE 40 424 - -
Lele38g0828 430 Pfam Patatin-like phospholipase 52 272 IPR002641 GO:0006629
Lele38g0828 430 Gene3D Cytosolic phospholipase A2 catalytic domain 39 429 - -
Lele38g0828 430 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 52 273 IPR002641 GO:0006629
Lele38g0828 430 SUPERFAMILY FabD/lysophospholipase-like 48 409 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0828 Lele-ChrLele38 20033399 20037864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0828 36 423 Miscellaneous Gene Families AT2G26560 45.274 8.47e-105 315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0828 38 20033399 20037864 Lele39g0509 39 4210763 4221956 hybridization
Lele38g0828 38 20033399 20037864 Lele40g0784 40 18275446 18280858 hybridization