Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0466 ATGGATTGGTTCTCATGGCTTTCAAGAACAAGCCTTGACCCATCTCTGATGTATGAATATGGCCTTGTTTTTGCTCACAACGAGCTTGAGAAACAAGACATAGTTTATTTCAACCATGAGTTTCTTCAGAGCATGGGAATCTCCATAGCCAAGCACAGGCTTGAAATTCTCAAGCTTGCAAAGAAGGAAAAGCCCAGAAGAAGAAGAAGAAGCTCAAATCCAGTGTCAAGGCTCGTTAATGGGGCAATCAAGAAGACCAAGAATTGCTTGTCAAATTACATTCATTCTCTGATTCACAGAGAAAAATCAGCACTTGTGGTGGTTCCCACCACCAATAGGCCAAGTGATCATCAGGAAACAAGATGGAAGAGTTGTATGGTGAAGAGAAACAGAAGCAATAATAATAAGATGACCGTGATGAATAGTAACAATTATAAGCAAGAGAGGCTTCTTCTCACAAATGGGAATTCTGCAGTAGTTCCTAGTGGATCTGTTCTCGATGGGTTTTCAGTTTCAAACCCAAAGGTGAAGAATTTGCAGAAGGAGATGAAGAAGATGGCTGAAGAAGAAGAAGAAGATGATGATGGGTATTGGTCAGCTGCTCTTGAAGAGTTCAGGTGGGATACTATGTTTCAGGATCTAAAGCCAAACTGA 654 0.4098 MDWFSWLSRTSLDPSLMYEYGLVFAHNELEKQDIVYFNHEFLQSMGISIAKHRLEILKLAKKEKPRRRRRSSNPVSRLVNGAIKKTKNCLSNYIHSLIHREKSALVVVPTTNRPSDHQETRWKSCMVKRNRSNNNKMTVMNSNNYKQERLLLTNGNSAVVPSGSVLDGFSVSNPKVKNLQKEMKKMAEEEEEDDDGYWSAALEEFRWDTMFQDLKPN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0466 217 PANTHER OSJNBA0033G05.11 PROTEIN 1 217 - -
Lele40g0466 217 SUPERFAMILY SAM/Pointed domain 17 63 IPR013761 -
Lele40g0466 217 Gene3D - 1 69 IPR013761 -
Lele40g0466 217 CDD SAM_superfamily 2 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0466 Lele-ChrLele40 3869556 3870209 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0770 41 17578063 17582293 Lele40g0466 40 3869556 3870209 CCT
Lele42g0763 42 20644050 20657160 Lele40g0466 40 3869556 3870209 CCT
Lele40g0466 40 3869556 3870209 Lele40g0466 40 3869556 3870209 ECH
Lele37g0522 37 4313853 4314506 Lele40g0466 40 3869556 3870209 hybridization
Lele38g0494 38 4018197 4018853 Lele40g0466 40 3869556 3870209 hybridization