Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0409 ATGGTGGCAATGTTGGCGTCTTTGCTGGTTACATCCTTGCCGGTGCTCGTGGCGGTGGTTGATGTGTTGGTACCTTGTGTTTTGATCTCCAGCTTTACGTGCGTGAGGTGTCACGATTTTAGAGAACATTTGAGTCGATACACATTCAAGGGTTCCCTGACAGATATTCCTCTCGTTTCCATCATAAGATCGTTCATCATTATATGTGCGTATAGTATTTGCGATGGTCCTGCTTTGTCACATGGTCCTTACCTTGGAACTGTGTCTCTGTGCTCCTTTCTTTCAGTTGTTCTTCTTTCAGTTAAAGCTTGTGTTTTCTCTGTAAATTCTCACATTGAAGCTGAAGCTGCAGCTTCTCTCTCAAAGCAGAGACTCCATTTGAAGAAGTCATGGGGAATGCCTGTACTCTTTCTCTCATCAGTTGTTTTCGCCCTTGGCCACACTGTGGTAGCTTATAGAACCAGCTGCAGGGCTCGGAGAAAGCTATTGTTTCACCGTGTTGATCCAGAAGCTGTACTTTCATGCAAAGTTTTCTCTTACTACCAGAAGGTCCCACGATCTCCTACTCCTTCTGGTGTTAGAACCCCAAAAAGTGACAGCGAAATGAGACGGAGACCTTTTGGGACAGCTTGTGATGAAGAAATGACACTTAAATCACTTGCAGACTCTGACAGCTTATTCATTACATGTCAAGGACTTACAGTCCATTACAAGGTCTGCTTGCCTGGTTCGCCACCACATACCCTGTCCTCTGCATCCATCGGTGAACCAAATTATAGCAGTGCCACTTCATCAATGGCTGGGGGATTTGCTAAATTCAATAGGCATTCGGCAAGTATGTCTCCAAACATCCAGAGGCAACTCCACAGGAGCTATAGCAATCAATTCCATGGCTCATCTCTATATACTCCACTTTTAGATGGTCCTGTGACTTCTCCTGCTCTTTCCAAAGAGATACCTGCTTTGTGCCTAGAAAAAAATCATGAAGAAACTAATAAATTAGATTCTATGAATTTGGAGAAAAAATTGGATGGTACCACTACCGGTGAATTAGGCGTTGTCCTGGTACATGGATTTGGTGGAGGAGTCTTCTCTTGGAGGCATGTTATGGGATCTATTGCTCGACAAAGTAATTGCACTGTTGCTGCATTTGACAGGCCTGGCTGGGGACTAACTTCAAGGCCTCGTCGAAAGGAGTGGGAGGAAAAAGACTTACCTAATCCATATAAGCTTGATAGTCAGTGTGTTAGTGGTTTTTTATGCAAAAAGAAAAAAGAAAAAAGAACGGTTGACCTGCTTTTATCATTTTGTTCCGAGTTTGGTTTCTCGTCTGTGGTGCTTATTGGTCATGATGATGGAGGGTTGCTTGCTTTGAAGGCTGCACAAAGAGTTCAATCATCAATGAATTCTTCTAATGTTATTATCAAAGGGGTTGTATTGCTAAATGTTAACTTGTCAAGAGAAGTGGTTCCTTCCTTTGCGAGGATCCTTCTGCATACATCTCTTGGAAAGAAGCACTTGGTTCGCCCTTTGTTAAGAACAGAAATCACTCAAGTAGTGAACCGACGTGCTTGGTATGATGCTACCAAGCTGACAACAGAAGTTTTAAGTCTCTACAAGGCTCCGCTATATGTAGAAGGATGGGATGAAGCTCTTCATGAGATTGGGAAATTGTCATCTGAAACCATACATTCATCAAAAAGTGCAGAATCATTGCTAGAGGCTGTGGAAGACGTGCCAATGTTGGTCATTGCTGGGGCTGAAGATTCCCTTGTCTCTCTCGGCTCTTGCCAAACCATGGCCTCAAAACTTGTAAATTCTAGACTCGTTGCGATATCTGGTTGTGGCCATCTGCCTCAAGAAGAATGTCCAAAGGCGTTGCTTGCTGCCATATCACCCTTCATTAGTAACTTGTCTATATACTACGTGGTACCTCGGACACCATTACATCGCTATCCTTCGCAGAGGTTTCTATCCTACGCCTTGAGCGTAAATCACATCGATGTTTCGCAATTCATAACTACCTTCCCCGCCGAGTCAAACCCGCTTCAACTCCCCGCGCACGTTAGAGGCAAACCTCCCAAATTTATTTCTTTCTTTCCGTGTACACTGTCTTCCAAAGGCGCGAAACAAACTATGCGTTTCTTGTCTCTTCCTCTTTCTGTCAGCTTTGCTCAGTGTACCAACACTTCTATGGCGCCCGGGTCGGCTTCTCTAATGTGGTTCCGAAAGGGTCTTAGGATCCATGACAACCCGGCCCTGGATTTTGCCCGCCAATGTTCGGATCGTATTTACCCTGTCTTCGTTATCGACCCGCATTACATGGAGCCCGACCCCAATGCATTTTCCCCCGGTTCCACTCGTGCCGGTCTCAACCGGATTAAGTTCCTGCTTGAAAGCCTTGTGGACCTTGATTTGAACCTTAAGAGGCTCGGATCGCGACTGCTCATTCTTAAGGGTGAACCAGGAAAGGTTTTGATTCAATGCTTAGAGGAGTGGAACATCAGAAAGCTTTGCTTTGAATATGACACTGATCCATATTATCAGGCTTTAGATACTAAAGTTAAGAACTATGCAGTGGCTGCTGGGATTGAGGTTTTCTCTCCTGTGAGTCACACGCTCTTCAATCCATCGGATATTATACAGAAGAATGGAGGGAAGCCACCTCTTAGTTATCAATCGTTTGTGAAGATTGCTGGACAACCGTCATGCCCTCTTTCAACTATGGTTTCCTCACTTCCTCCGGTTGGAGATCTTGGAAGTTGTGAGATTTCTGAAGTTCCAACTATCGAAGAACTCGGATATGGAAATGTTAAACAGGAAGAATTCTCTCCTTTCAAAGGTGGTGAATCAGAAGCATTGAAGAGGCTGACAGAGTGCATGAAGAAAAAGGAGTTCGTGGCCAACTTTGAGAAACCCAAGGGTAATCCATCTGCATTTCTTAGACCGGAAACAACTGTTCTATCACCTTATTTGAAATTTGGTTGTTTATCCTCCAGATATTTCTACCAACGGGTTCAAGATGTGTATAAAACTATGCCGAAGCATACATCACCACCTGTTTCTCTTCTAGGACAGTTGTTATGGCGAGACTTCTTCTACACTGTTGCATTTGGGACTCCAAATTTTGATAAGATGAAAGGCAATAGAATATGCAAGCAGATACCTTGGAAGATTGATGACAAACTTCTGGAAGCATGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCCATCATGGTTCAGCTACGACAATGGGGTTGGATGCACCATCTGGCACGACATTCTGTTGCGTGTTTTCTTACTCGTGGCGACCTGTTTATTCATTGGGAAAAAGGGCGCGACGTCTTTGAGAGGCTTCTTGTTGATTCAGATTGGGCAATTAATAATGGAAACTGGCTTTGGCTCTCATGTTCATCCTTCTTTTATCAGTATAATCGTATTTACTCACCAATCTCATTTGGTAAGAAGTATGATCCTAAAGGAGACTACATCAAGCATTTTCTTCCTGTCTTAAAAGATATACCTAAGGAATACATTTATGAACCGTGGACTGCTCCTCTAAGCGTTCAGAAGAAAGCAAATTGCATTATAGGCAAAGACTACCCAATGCCAGTCGTGTCTCATGATTCTGCGATCAAAGAGTGCCGAAGAAGAATGGCTGAGGCATATGCGTTGAACAAGGAATTGAATGATTCAGTAAGCGAAGAAGATCTGAAAAACTTAAGGAGGAAACTTGATGAGGCAACAGAAGAGAAAGAGATCAAACATAAAAGGTATAGACAGAAGCTGATTGGTTGA 3804 0.4364 MVAMLASLLVTSLPVLVAVVDVLVPCVLISSFTCVRCHDFREHLSRYTFKGSLTDIPLVSIIRSFIIICAYSICDGPALSHGPYLGTVSLCSFLSVVLLSVKACVFSVNSHIEAEAAASLSKQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPEAVLSCKVFSYYQKVPRSPTPSGVRTPKSDSEMRRRPFGTACDEEMTLKSLADSDSLFITCQGLTVHYKVCLPGSPPHTLSSASIGEPNYSSATSSMAGGFAKFNRHSASMSPNIQRQLHRSYSNQFHGSSLYTPLLDGPVTSPALSKEIPALCLEKNHEETNKLDSMNLEKKLDGTTTGELGVVLVHGFGGGVFSWRHVMGSIARQSNCTVAAFDRPGWGLTSRPRRKEWEEKDLPNPYKLDSQCVSGFLCKKKKEKRTVDLLLSFCSEFGFSSVVLIGHDDGGLLALKAAQRVQSSMNSSNVIIKGVVLLNVNLSREVVPSFARILLHTSLGKKHLVRPLLRTEITQVVNRRAWYDATKLTTEVLSLYKAPLYVEGWDEALHEIGKLSSETIHSSKSAESLLEAVEDVPMLVIAGAEDSLVSLGSCQTMASKLVNSRLVAISGCGHLPQEECPKALLAAISPFISNLSIYYVVPRTPLHRYPSQRFLSYALSVNHIDVSQFITTFPAESNPLQLPAHVRGKPPKFISFFPCTLSSKGAKQTMRFLSLPLSVSFAQCTNTSMAPGSASLMWFRKGLRIHDNPALDFARQCSDRIYPVFVIDPHYMEPDPNAFSPGSTRAGLNRIKFLLESLVDLDLNLKRLGSRLLILKGEPGKVLIQCLEEWNIRKLCFEYDTDPYYQALDTKVKNYAVAAGIEVFSPVSHTLFNPSDIIQKNGGKPPLSYQSFVKIAGQPSCPLSTMVSSLPPVGDLGSCEISEVPTIEELGYGNVKQEEFSPFKGGESEALKRLTECMKKKEFVANFEKPKGNPSAFLRPETTVLSPYLKFGCLSSRYFYQRVQDVYKTMPKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDKMKGNRICKQIPWKIDDKLLEAWREARTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFIHWEKGRDVFERLLVDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPKGDYIKHFLPVLKDIPKEYIYEPWTAPLSVQKKANCIIGKDYPMPVVSHDSAIKECRRRMAEAYALNKELNDSVSEEDLKNLRRKLDEATEEKEIKHKRYRQKLIG 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0409 1267 Gene3D alpha/beta hydrolase 335 639 IPR029058 -
Lele40g0409 1267 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 736 874 IPR006050 -
Lele40g0409 1267 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 736 920 IPR036155 -
Lele40g0409 1267 Pfam DNA photolyase 738 898 IPR006050 -
Lele40g0409 1267 Coils Coil 1214 1260 - -
Lele40g0409 1267 Pfam Alpha/beta hydrolase family 353 629 IPR000073 -
Lele40g0409 1267 Gene3D HUPs 739 948 IPR014729 -
Lele40g0409 1267 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 1041 1266 - -
Lele40g0409 1267 FunFam Cryptochrome-1 1041 1263 - -
Lele40g0409 1267 Pfam FAD binding domain of DNA photolyase 1025 1222 IPR005101 -
Lele40g0409 1267 PANTHER CRYPTOCHROME 738 1228 IPR002081 -
Lele40g0409 1267 Gene3D - 872 1034 - -
Lele40g0409 1267 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 939 1228 IPR036134 -
Lele40g0409 1267 SUPERFAMILY alpha/beta-Hydrolases 351 637 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0409 Lele-ChrLele40 3376116 3386125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0409 1 638 Miscellaneous Gene Families AT1G80280 63.945 0.0 755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0409 40 3376116 3386125 Lele40g0409 40 3376116 3386125 ECH
Lele37g0467 37 3877602 3881139 Lele40g0409 40 3376116 3386125 hybridization
Lele38g0435 38 3546627 3550225 Lele40g0409 40 3376116 3386125 hybridization