Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0187 ATGGAATTACCGAAGGAGAAGCATCGTTCTATTAATGATGGAGCTGACAGTAGTTCTTGCATCATGCAGAAGTTCAAGCTCTATGAAACTCGCTCGAAATTTTATATGATTGGGAGAGACAAGAGCAGAACCTCTTGGAGGGTCTTAAAGATGGATAGATTGGAGACAGCTGAACTAAATATCACCGAGGATTCGATGATATACTCAGAAATTGAGTGTTGTGATCTTTTAAGACGGATACATGAAGGAAACAGGTCAACTGGGGGACTTAAATTTGTTACAACTTGCTATGGAATCATTGGATTCATCAAATTTCTTGAGCCATATTACATGTTGCTCATAACAAATCGAAGGAAGGTTGGCACAATTTGTGGGCATGCAATATATACCATCACAAAGAGTGAAATGATTCCGGTTCCACATCTTGCTGTGCAATCCAAAATGGCATATTCTAAAGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTAGGAAGGACTTCTTTTTCAGCTACTCATACCATGTCATGCGAAGTCTTCAAAAGAACTTGTCTGATAATAGCACAACAGGGCACAAACTTTACGAAACCATGTTTGTTTGGAATGAGTTCTTAACTCGTGAAATCAGGAATAACCTTCAGAATACTTCCTGGACAGTTGCTTTAGTGCATGGCTTTTTTAAACAGGTTAAACTCTCTGTATTAGAGAGGGAGTTCTACTTAACTATCATTGCTAGACGCTCACGTCAATATGCTGGCACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGCAGAGTGGCTAATGATGTTGAGACAGAGCAAATAGTCTTTGAAGATGCTCAAGATGGATGCCCAATGCAAATAAGTTCTGTGATACAGATGCGGGGATCAATTCCTCTTTTCTGGTCTCAAGAAGCCTCTCCATTGAATATGAAGCCCGACATTATATTATCAAAGGAGGACCATAACTTTGAAGCCACGAGACTTCATTTTGAAAACCTGGTCAAGAGATATGGAAACCCCATTATTATATTGAACTTGATTAAGACTCGTGAGAAGAAGCCTCGAGAAACTATTCTCCGAGCTGAGTTTGCAAATGCGGTCAGGTCCATTAATAAAACCATGAGAGGGGAAAATCGCCTCAGGTTCCTTCACTGGGATCTGAATCGGCACTCAAAATGCAAAGCTACTAATGTGTTGACACAACTGGGAAAAGTTGCTGCTTTTGCTTTAAAATTAACGGGCATCTTCTACCGCCAAGTGACACCGAATGTAAGGCCAGAGGAATTATTGCAAAATTCATTCTCTGAGAATAATATCCATGATCTCTATGGAACCCAACAGGCTTGTATTAATGAGGATACTCCTGATAGGGAATATAAAATTGATAGATGTTATTTCAAAGATGATGTGATTGGAGATTCCTGTGTCAAAGCCTGGACGCTTCAATCAGGGGTCTTGAGGACCAATTGCATAGACTGTTTAGATCGTACTAATGTTGCCCAATATGCTTATGGATTAACAGCTCTTGGACGTCAGCTACAAGCTTTAAGATATTTGGAATCCCCATATATTGATTTTGACAACCCTTTGGCAACGGAGTTAATGGCGATCTATGAGTCGATGGGTGACACATTAGCATTGCAATACGGGGGTTCTGCAGCACACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCGACGCAATCCCAGGAATTTATCAGAACTCTGCAGCGCTATTACAATAATACATACTTGGATGGTGATAAACAAAATGCAATCAACATATTTTTGGGGCATTTTCAGCCTCAACAGGGAAAACCAGCGTTATGGGAGCTAGATTCTGATCAGTCTTACAATGTTGCCAAGCATGGTTTAATTTCAGCTGATGATAATATTAGGTCGACCATCAAAAGATCTCTATCAGATGGCAATATTGTTTGTGAAAGTGACACAAGTAGGAACATGGATGATACAAACAGTCAGCATTTATCTGAAAAGGCTGATGACCAATGTCTTTCAGAGTCTGATCCAGATGTCTTTACTTGTGGAAGTGATATTTGTCAATACAGGCAGCTGCAAAGAGAAGTGCTTGAGGGCCGATGTTATGAAAGTGATCACATTTGTTATGATGAACATGGGGATGCATGTGACTGCTCAAATTTTCTTGATGTGGATTGGCTTTCATCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAGAGGAAACTTATGGTATCCGAGCTTAAATTGGATTACTCTAGCAGGTCAACCAGCATCTCTTCAGAGAACATTGCCAATGAACTAAGAACTGAGGCGAGTACATCTGCAAATGAATCTGGACCTAGCATGAAGGCGAGGAAGCAGAGCTCCCCAGAGCTGAACAAAGATGGTGGTTTTGCCGAAAACTTTTCGCGCTGGGTTACTCATGGAGAGATGCTTTATGTCTAG 2469 0.4046 MELPKEKHRSINDGADSSSCIMQKFKLYETRSKFYMIGRDKSRTSWRVLKMDRLETAELNITEDSMIYSEIECCDLLRRIHEGNRSTGGLKFVTTCYGIIGFIKFLEPYYMLLITNRRKVGTICGHAIYTITKSEMIPVPHLAVQSKMAYSKDENRYKKLLCSVDLRKDFFFSYSYHVMRSLQKNLSDNSTTGHKLYETMFVWNEFLTREIRNNLQNTSWTVALVHGFFKQVKLSVLEREFYLTIIARRSRQYAGTRYLKRGVNEKGRVANDVETEQIVFEDAQDGCPMQISSVIQMRGSIPLFWSQEASPLNMKPDIILSKEDHNFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKTMRGENRLRFLHWDLNRHSKCKATNVLTQLGKVAAFALKLTGIFYRQVTPNVRPEELLQNSFSENNIHDLYGTQQACINEDTPDREYKIDRCYFKDDVIGDSCVKAWTLQSGVLRTNCIDCLDRTNVAQYAYGLTALGRQLQALRYLESPYIDFDNPLATELMAIYESMGDTLALQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQNAINIFLGHFQPQQGKPALWELDSDQSYNVAKHGLISADDNIRSTIKRSLSDGNIVCESDTSRNMDDTNSQHLSEKADDQCLSESDPDVFTCGSDICQYRQLQREVLEGRCYESDHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERKLMVSELKLDYSSRSTSISSENIANELRTEASTSANESGPSMKARKQSSPELNKDGGFAENFSRWVTHGEMLYV 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0187 822 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 787 IPR043573 GO:0043813|GO:0046856
Lele40g0187 822 MobiDBLite consensus disorder prediction 770 805 - -
Lele40g0187 822 MobiDBLite consensus disorder prediction 770 795 - -
Lele40g0187 822 Pfam SacI homology domain 97 396 IPR002013 GO:0016791
Lele40g0187 822 ProSiteProfiles Sac phosphatase domain profile. 161 555 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0187 Lele-ChrLele40 1473585 1481530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0187 22 820 Acyl Lipid Metabolism Gene Families AT5G20840 55.244 0.0 844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0187 40 1473585 1481530 Lele40g0187 40 1473585 1481530 ECH
Lele37g0198 37 1573386 1581329 Lele40g0187 40 1473585 1481530 hybridization
Lele38g0199 38 1575846 1583845 Lele40g0187 40 1473585 1481530 hybridization