Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0199 ATGGAGTTACCGAAGGAGAAGCATCGTTCTATTAATGATGGAGCTGACAATAGTTCTTGCATCATGCAGAAGTTCAAGCTCTATGAAACTCGCTCGAAATTTTATATGATTGGGAGAGACAAGAGCAGAACCTCTTGGAGGGTCTTAAAGATTGATAGATTGGAGACAGCTGAACTAAATATCACTGACGATTCGATGATATACTCAGAAATTGAGTGTTGTGATCTTTTAAGACGGATACATGAAGGAAACAGGTCAACTGGGGGACTTAAATTTGTTACAACTTGCTATGGAATCATTGGATTCGTCAAATTTCTTGAGCCATATTACATGTTGCTCATAACAAATCGAAGGAAGATTGGCACAATTTGTGGGCATGCAATATATACCATCACAAAGAGTGAAATGATTCCGGTTCCACATCTTGCTGTACGATCCAAAATGGCATATTCTAATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTAGGAAGGACTTCTTTTTCAGCTACTCATACCATGTCATGCGAAGTCTTCAAAAGAACTTATCTGATAATAGCACAACAGGGCACAAACTTTACGAAACCATGTTTGTTTGGAATGAGTTCTTAACTCGTGAAATCAGGAATAACCTTCAGAGTACTTCTTGGACAGTTGCTTTAGTGCATGGCTTTTTTAAACAGGTTAAACTCTCTGTATTAGAGAGGGAGTTCTACTTAACTATCATTGCTAGACGCTCACGTCATTATGCTGGCACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGCAGAGTGGCTAATGATGTTGAGACAGAGCAAATAGTCTTTGAAGATGCTCAAGATGGATGCCCAAGGCAAATAAGTTCTGTGGTACAGATGCGGGGATCAATTCCTCTTTTCTGGTCTCAAGAAGCCTCTCCATTGAATATGAAGCCTGACATTATATTATCAAAGGAGGACCATAACTATGAAGCCACGAGACTTCATTTTGAAAACCTGGGCAAGAGATATGGAAACCCCATTATTATATTGAACTTGATTAAGACTCGTGAGAAGAAGCCTCGAGAAACTATTCTCCGAGCTGAGTTTGCAAATGCGGTCAGGTCCATTAATAAAACCATGAGAGGGGAAAATCGCCTCAGGTTCCTTCACTGGGATCTGAATCGGCACTCAAAATGCAAAACTACTAATGTGTTGACACAACTGGGAAAAGTTGCTGCTTTTGCTTTAAAATTAACGGGCATCTTCTACTGCCACGTGACACCGAATGTAAGGCCAGAGGAATTATTGCAAAATTCATTCTCTGAGAATAATATCCATGATCTCTATGGCACCCAACAGGCTTGTATTAATGAGGATACTCCTAATAGGGAATCTAAAATTGATAGATGTTATTTCAATGATGATGTTATTGGAGATTACTGTGTCAAAGCCTGGACGCTTCAATCAGGGGTCTTGAGGACCAATTGCATAGACTGTTTAGATCGTACTAATGTTGCCCAATATGCTTATGGATTAACTGCTCTTGGACGTCAGCTACAAGCTTTAAGATATTTGGAATCCCCATATATTGATTTTGACAATCCTTTGGCAACGGAGTTAATGGCTATCTATGAGTCGATGGGTGACACGTTAGCATTGCAATACGGGGGTTCTGCAGCACACAATAAGATATTTTCTGAGAGAAGAGGACAATGGAAGGCAGCGGCGCAATCCCAGGAATTTATCAGAACTCTACAGCGCTATTACAATAATACATACTTGGATGGTGATAAACAAAATGCAATCAACATATTTTTGGGGCATTTTCAGCCACAACAGGGAAAACCAGCGTTATGGGAGCTAGATTCAGATCAGGCTTACACTGTTGCCAAGCATGGTTTAATTTTAGCTGATGATAATATTAGGTCAACCATCAAAAGATCGCTATCAGATGGCAATATTGTTTGTGAAAGTGACACAAGTAGGAACATGGATGATACAAACAGTCAGCATTTATCTGAAAAGGCTGATGACCAATGTCTTTCAGAGTCTGATCCAGATGTCTTTACTTGTGGAAGTGATATTTGTCAATACAGGCAGATGCAAAGAGGAAGGAATTACTTGAGAGGAAACTTATGGTATCCGAGCTTAAATTGGATTACTCTAGCAGGTCAACCAGCATCTCTTCCGAATGAACTAAGAACTGAGGCGAGGAAGCATAGCGCCCCAGAGCTGAACAAAGATGGTGGTTATGCCGAAAACTTTTCGCGCTGGGTTACTCATGAAGAGATGCTTTATGTCTAG 2295 0.4022 MELPKEKHRSINDGADNSSCIMQKFKLYETRSKFYMIGRDKSRTSWRVLKIDRLETAELNITDDSMIYSEIECCDLLRRIHEGNRSTGGLKFVTTCYGIIGFVKFLEPYYMLLITNRRKIGTICGHAIYTITKSEMIPVPHLAVRSKMAYSNENRYKKLLCSVDLRKDFFFSYSYHVMRSLQKNLSDNSTTGHKLYETMFVWNEFLTREIRNNLQSTSWTVALVHGFFKQVKLSVLEREFYLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFEDAQDGCPRQISSVVQMRGSIPLFWSQEASPLNMKPDIILSKEDHNYEATRLHFENLGKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKTMRGENRLRFLHWDLNRHSKCKTTNVLTQLGKVAAFALKLTGIFYCHVTPNVRPEELLQNSFSENNIHDLYGTQQACINEDTPNRESKIDRCYFNDDVIGDYCVKAWTLQSGVLRTNCIDCLDRTNVAQYAYGLTALGRQLQALRYLESPYIDFDNPLATELMAIYESMGDTLALQYGGSAAHNKIFSERRGQWKAAAQSQEFIRTLQRYYNNTYLDGDKQNAINIFLGHFQPQQGKPALWELDSDQAYTVAKHGLILADDNIRSTIKRSLSDGNIVCESDTSRNMDDTNSQHLSEKADDQCLSESDPDVFTCGSDICQYRQMQRGRNYLRGNLWYPSLNWITLAGQPASLPNELRTEARKHSAPELNKDGGYAENFSRWVTHEEMLYV 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0199 764 Pfam SacI homology domain 97 395 IPR002013 GO:0016791
Lele38g0199 764 ProSiteProfiles Sac phosphatase domain profile. 160 554 IPR002013 GO:0016791
Lele38g0199 764 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 676 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0199 Lele-ChrLele38 1575846 1583845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0199 22 689 Acyl Lipid Metabolism Gene Families AT5G20840 59.675 0.0 790
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0199 38 1575846 1583845 Lele38g0199 38 1575846 1583845 ECH
Lele38g0199 38 1575846 1583845 Lele39g1225 39 20882988 20891492 hybridization
Lele38g0199 38 1575846 1583845 Lele40g0187 40 1473585 1481530 hybridization