Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0198 ATGGAGTTACCGAAGGAGAAGCAGCGTTCTATTAATGATGACTATAGTTCTTGCATCATGCAGAAGTTCAAGCTCTATGAAACTCGCTCGAAATTTTATATGATTGGTAGAGACAAGAGCAGAACCTCTTGGAGGGTATTAAAGATTGATAGATTGGAGACAGCTGAACTAAATATCACTGAGGATTCGATGATATACTCAGAAATTGAGTGTTGTGATATTTTAAGACGGATACATGAAGGAAACAGGTCAACTGGGGGACTTAAATTTGTTACAACTTGCTATGGAATCATTGGATTCATCAAATTTCTTGAGCCATATTACATGTTGCTCATAACAAATCGAAGGAAGATTGGCACAATTTGTGGGCATGCAATATATACCATTACAAAGAGTGAAATGATTCCGGTTCCACATCCTGCTGTGCGATCCAAAATGGCATATTCTAAAGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTAGGAAGGACTTCTTTTTCAGCTACTCATACCATGTCATGCGAAGTCTTCAAAAGAACTTATCTGATAATAGCACAACAGGGCACAAACTTTACGAAACAATGTTTGTTTGGAATGAGTTCTTAACTCGTGAAATCAGGAATAACCTTCAGAATACTTCCTGGACAGTTGCTTTAGTGCATGGCTTTTTTAAACAGGTTAAACTCTCTGTATTTGAGAGGGAGTTCTACTTAACTATCATTTCTAGACGCTCGTGTCATTATGCTGGCACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGCAGAGTGGCTAATGATGTTGAGACAGAGCAAATAGTCTTTGAAGATGCTCAAGATGGATGCCCCATGCAAATAAGTTCTGTGGTACAGATGCGGGGATCAATTCCTCTTTTCTGGTCTCAAGAAGCCTCTCCATTGAATATGAAGCCTGACATTATATTATCAAAGGAGGACCATAACTTTGAAGCCACAAGACTTCACTTTGAAAACCTTGTCAAGAGATATGGAAACCCCATTATTATATTGAACTTGATTAAGACGCGTGAGAAGAAGCCTCGAGAAACTATTCTCCGAGCTGAGTTTGCAAATGCTGTCAGGTCCATTAATAAAACCATGAGAGGGGAAAATTGCCTCAGATTCCTTCACTGGGATCTGAATCGGCACTCAAAATGCAAAGCAACTAATGTGTTGACACAACTGGGAAAAGTTGCTGCTTTTGCTTTAAAATTAACGAGCATCTTCTACTGTCAAGTGACACCGATTGTAAGGCCAGAGGGATTATTGCAAAATTCATTCTCTGAGAATAATATCCATGATCTCTATGCCACTCAACAGGCTTGTATTAATGAGGATACTCCTAATAAGGAAACTAAAATTAATAGATGTTATTTCAATGATGATGTGATTGGAGATTACTGTGTCAAAGCCTGGACGCTTCAATCAGGGGTTTTGAGGACCAATTGCATAGACTGTTTAGATCGTACTAATGTCGCCCAATATGCTTATGGATTAACTGCGCTTGGACGTCAGCTACAAGCTTTAAGATATTTGGAATCCCCATATATTGATTTTGACAACCCTTTGGCAACGGAGTTAATGACTGTCTATGAGTTGATGGGTGACACATTAGCATTGCAATATGGGGGTTCTGCCGCACACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCGATGCAATCCCAGGAATTTATCAGAACTCTGCAGCGCTATTACAATAATACATACTTGGATGGTGATAAACAAAATGCAATCAACATATTTTTGGGGCATTTTCAGCCGCAACAGGGAAAACCAGCGTTATGGGAGCTAGATTCAGATCAGTCTTACAATGTTGCCAAGCATGGGTTAGTTTTAGCTGATGATAATATTAGGTCAACTATCAAAAGATCGCTCTCAGATGGCAATATTGTTTGTGAAAGTGACTCAAGTAGGAACATGGATGATACAAACAGTCAGCATTTATCTGAAAAGGCTGATGACCAATGCCTTTCAGAGTCTGATCCAGATGTCTTTACTTGTGGAAGTGATATTTGTCAATACAGGCAGATGCAAAGGGGAGTGTTTGAGGGCCGATGTTATGAAAGTGATCACATGAACATGGGGATGCGTGTGACTGCTCAAATTTTCTTGATGTGGACTGGCTTTCATCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAGAGGAAACTTATGGTATCCGAGCTTAAATTGGATTACTCTAGCAGGTCAACCAGCATCTCATCAGAGAACATTGCAAATGAACTAA 2310 0.3944 MELPKEKQRSINDDYSSCIMQKFKLYETRSKFYMIGRDKSRTSWRVLKIDRLETAELNITEDSMIYSEIECCDILRRIHEGNRSTGGLKFVTTCYGIIGFIKFLEPYYMLLITNRRKIGTICGHAIYTITKSEMIPVPHPAVRSKMAYSKDENRYKKLLCSVDLRKDFFFSYSYHVMRSLQKNLSDNSTTGHKLYETMFVWNEFLTREIRNNLQNTSWTVALVHGFFKQVKLSVFEREFYLTIISRRSCHYAGTRYLKRGVNEKGRVANDVETEQIVFEDAQDGCPMQISSVVQMRGSIPLFWSQEASPLNMKPDIILSKEDHNFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKTMRGENCLRFLHWDLNRHSKCKATNVLTQLGKVAAFALKLTSIFYCQVTPIVRPEGLLQNSFSENNIHDLYATQQACINEDTPNKETKINRCYFNDDVIGDYCVKAWTLQSGVLRTNCIDCLDRTNVAQYAYGLTALGRQLQALRYLESPYIDFDNPLATELMTVYELMGDTLALQYGGSAAHNKIFSERRGQWKAAMQSQEFIRTLQRYYNNTYLDGDKQNAINIFLGHFQPQQGKPALWELDSDQSYNVAKHGLVLADDNIRSTIKRSLSDGNIVCESDSSRNMDDTNSQHLSEKADDQCLSESDPDVFTCGSDICQYRQMQRGVFEGRCYESDHMNMGMRVTAQIFLMWTGFHLLEILVKRNYLRGNLWYPSLNWITLAGQPASHQRTLQMN 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0198 769 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 12 674 IPR043573 GO:0043813|GO:0046856
Lele37g0198 769 MobiDBLite consensus disorder prediction 664 678 - -
Lele37g0198 769 MobiDBLite consensus disorder prediction 653 678 - -
Lele37g0198 769 ProSiteProfiles Sac phosphatase domain profile. 159 553 IPR002013 GO:0016791
Lele37g0198 769 Pfam SacI homology domain 95 394 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0198 Lele-ChrLele37 1573386 1581329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele37g0198 20 688 Acyl Lipid Metabolism Gene Families AT5G20840 59.823 0.0 796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0198 37 1573386 1581329 Lele37g0198 37 1573386 1581329 ECH
Lele37g0198 37 1573386 1581329 Lele39g1225 39 20882988 20891492 hybridization
Lele37g0198 37 1573386 1581329 Lele40g0187 40 1473585 1481530 hybridization